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Gene : EMB2271 A. thaliana

DB identifier  ? AT4G21130 Secondary Identifier  ? locus:2127408
Name  ? EMBRYO DEFECTIVE 2271 Brief Description  Transducin/WD40 repeat-like superfamily protein
TAIR Computational Description  Transducin/WD40 repeat-like superfamily protein;(source:Araport11)
TAIR Curator Summary  similar to man and yeast U3-55K genes, involved in processing of pre-ribosomal RNA.
TAIR Short Description  Transducin/WD40 repeat-like superfamily protein
TAIR Aliases  EMB2271

0 Gene Rifs

1 Organism

8 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2004  
Location: Chr4:11274296-11276299

Gene models - EMB2271 AT4G21130

? Gene models

Transcripts: 1  Exons: 6  Introns: 5 

Overlapping Features

? Genome features that overlap coordinates of this Gene

7 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
YAOL_ARATH function Component of a nucleolar small nuclear ribonucleoprotein particle (snoRNP) thought to participate in the processing and modification of pre-ribosomal RNA (By similarity). Essential for embryogenesis (By similarity). May function during late embryogenesis (PubMed:20699009).
YAOL_ARATH similarity Belongs to the WD repeat RRP9 family.

1 Proteins

Function

Gene Ontology

cellular component
nucleolus  ? ECO  
Cul4-RING E3 ubiquitin ligase complex  ? ECO  
ribonucleoprotein complex  ? ECO  
molecular function
U3 snoRNA binding  ? ECO  
biological process
rRNA processing  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets