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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G19985:CDS:7 | 82 | Chr4: 10830542-10830623 | Arabidopsis thaliana |
AT4G19985:CDS:5 | 212 | Chr4: 10830857-10831068 | Arabidopsis thaliana |
AT4G19985:CDS:1 | 516 | Chr4: 10831196-10831711 | Arabidopsis thaliana |
AT4G19985:CDS:2 | 543 | Chr4: 10831169-10831711 | Arabidopsis thaliana |
AT4G19985:CDS:2.1 | 543 | Chr4: 10831169-10831711 | Arabidopsis thaliana |
AT4G19985:CDS:7.1 | 82 | Chr4: 10830542-10830623 | Arabidopsis thaliana |
AT4G19985:CDS:6 | 57 | Chr4: 10830857-10830913 | Arabidopsis thaliana |
AT4G19985:CDS:4 | 59 | Chr4: 10831010-10831068 | Arabidopsis thaliana |
AT4G19985:CDS:1.1 | 516 | Chr4: 10831196-10831711 | Arabidopsis thaliana |
AT4G19985:CDS:2.2 | 543 | Chr4: 10831169-10831711 | Arabidopsis thaliana |
AT4G19985:CDS:7.2 | 82 | Chr4: 10830542-10830623 | Arabidopsis thaliana |
AT4G19985:CDS:6.1 | 57 | Chr4: 10830857-10830913 | Arabidopsis thaliana |
AT4G19985:CDS:4.1 | 59 | Chr4: 10831010-10831068 | Arabidopsis thaliana |
AT4G19985:CDS:1.2 | 516 | Chr4: 10831196-10831711 | Arabidopsis thaliana |
AT4G19985:CDS:3 | 45 | Chr4: 10831034-10831078 | Arabidopsis thaliana |
AT4G19985:CDS:1.3 | 516 | Chr4: 10831196-10831711 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G19985:exon:11 | 212 | Chr4: 10830857-10831068 | Arabidopsis thaliana |
AT4G19985:exon:10 | 892 | Chr4: 10830857-10831748 | Arabidopsis thaliana |
AT4G19985:exon:2 | 208 | Chr4: 10832030-10832237 | Arabidopsis thaliana |
AT4G19985:exon:15 | 392 | Chr4: 10830232-10830623 | Arabidopsis thaliana |
AT4G19985:exon:6 | 1228 | Chr4: 10831010-10832237 | Arabidopsis thaliana |
AT4G19985:exon:14 | 391 | Chr4: 10830233-10830623 | Arabidopsis thaliana |
AT4G19985:exon:7 | 739 | Chr4: 10831010-10831748 | Arabidopsis thaliana |
AT4G19985:exon:1 | 243 | Chr4: 10832030-10832272 | Arabidopsis thaliana |
AT4G19985:exon:9 | 59 | Chr4: 10831010-10831068 | Arabidopsis thaliana |
AT4G19985:exon:4 | 823 | Chr4: 10831196-10832018 | Arabidopsis thaliana |
AT4G19985:exon:13 | 387 | Chr4: 10830237-10830623 | Arabidopsis thaliana |
AT4G19985:exon:12 | 57 | Chr4: 10830857-10830913 | Arabidopsis thaliana |
AT4G19985:exon:8 | 69 | Chr4: 10831010-10831078 | Arabidopsis thaliana |
AT4G19985:exon:5 | 553 | Chr4: 10831196-10831748 | Arabidopsis thaliana |
AT4G19985:exon:3 | 90 | Chr4: 10832030-10832119 | Arabidopsis thaliana |
AT4G19990:exon:1 | 166 | Chr4: 10832214-10832379 | Arabidopsis thaliana |
AT4G19990:exon:2 | 131 | Chr4: 10832249-10832379 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G19985:five_prime_UTR:2 | 208 | Chr4: 10832030-10832237 | Arabidopsis thaliana |
AT4G19985:five_prime_UTR:4 | 526 | Chr4: 10831712-10832237 | Arabidopsis thaliana |
AT4G19985:five_prime_UTR:1 | 243 | Chr4: 10832030-10832272 | Arabidopsis thaliana |
AT4G19985:five_prime_UTR:5 | 307 | Chr4: 10831712-10832018 | Arabidopsis thaliana |
AT4G19985:five_prime_UTR:6 | 37 | Chr4: 10831712-10831748 | Arabidopsis thaliana |
AT4G19985:five_prime_UTR:3 | 90 | Chr4: 10832030-10832119 | Arabidopsis thaliana |
AT4G19990:five_prime_UTR:1 | 166 | Chr4: 10832214-10832379 | Arabidopsis thaliana |
AT4G19990:five_prime_UTR:2 | 131 | Chr4: 10832249-10832379 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G19990 | locus:2119737 | FRS1 | FAR1-related sequence 1 | 3489 | Chr4: 10832214-10835702 | A. thaliana | FAR1-related sequence 1;(source:Araport11) | NULL | FAR1-related sequence 1 | FRS1 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G19985.4 | 1365 | Chr4: 10830232-10832237 |
AT4G19985.3 | 1492 | Chr4: 10830232-10832237 |
AT4G19985.2 | 1677 | Chr4: 10830232-10832237 |
AT4G19985.1 | 1303 | Chr4: 10830233-10832272 |
AT4G19985.5 | 1430 | Chr4: 10830233-10832272 |
AT4G19985.6 | 1326 | Chr4: 10830237-10832018 |
AT4G19985.7 | 1156 | Chr4: 10830237-10832119 |
AT4G19990.3 | 2807 | Chr4: 10832214-10835700 |
AT4G19990.2 | 2666 | Chr4: 10832249-10835698 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G19985:three_prime_UTR:10 | 310 | Chr4: 10830232-10830541 | Arabidopsis thaliana |
AT4G19985:three_prime_UTR:3 | 312 | Chr4: 10830857-10831168 | Arabidopsis thaliana |
AT4G19985:three_prime_UTR:9 | 392 | Chr4: 10830232-10830623 | Arabidopsis thaliana |
AT4G19985:three_prime_UTR:8 | 309 | Chr4: 10830233-10830541 | Arabidopsis thaliana |
AT4G19985:three_prime_UTR:7 | 391 | Chr4: 10830233-10830623 | Arabidopsis thaliana |
AT4G19985:three_prime_UTR:1 | 159 | Chr4: 10831010-10831168 | Arabidopsis thaliana |
AT4G19985:three_prime_UTR:6 | 305 | Chr4: 10830237-10830541 | Arabidopsis thaliana |
AT4G19985:three_prime_UTR:5 | 387 | Chr4: 10830237-10830623 | Arabidopsis thaliana |
AT4G19985:three_prime_UTR:4 | 57 | Chr4: 10830857-10830913 | Arabidopsis thaliana |
AT4G19985:three_prime_UTR:2 | 24 | Chr4: 10831010-10831033 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
GNAT3_ARATH | function | Protein acetyltransferase with dual specificity triggering both N-alpha-acetylation (NTA) and epsilon-lysine acetylation (KA), possibly with a low efficiency or toward specific plastid substrates. |
GNAT3_ARATH | similarity | Belongs to the acetyltransferase family. GNAT subfamily. |
GNAT3_ARATH | tissue specificity | Expressed in green tissues. |
Function
Gene Ontology
cellular component | |
---|---|
chloroplast | ECO |
molecular function | |
N-acetyltransferase activity | ECO |
glucosamine 6-phosphate N-acetyltransferase activity | ECO |
biological process | |
peptidyl-lysine acetylation | ECO |
N-terminal protein amino acid acetylation | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...