External Links
- Aracyc
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- ATTED-II
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G17420:CDS:13 | 115 | Chr4: 9722544-9722658 | Arabidopsis thaliana |
AT4G17420:CDS:10 | 92 | Chr4: 9722738-9722829 | Arabidopsis thaliana |
AT4G17420:CDS:9 | 128 | Chr4: 9722928-9723055 | Arabidopsis thaliana |
AT4G17420:CDS:7 | 61 | Chr4: 9723139-9723199 | Arabidopsis thaliana |
AT4G17420:CDS:6 | 96 | Chr4: 9723345-9723440 | Arabidopsis thaliana |
AT4G17420:CDS:5 | 39 | Chr4: 9723524-9723562 | Arabidopsis thaliana |
AT4G17420:CDS:4 | 179 | Chr4: 9723687-9723865 | Arabidopsis thaliana |
AT4G17420:CDS:3 | 40 | Chr4: 9723955-9723994 | Arabidopsis thaliana |
AT4G17420:CDS:2 | 60 | Chr4: 9724083-9724142 | Arabidopsis thaliana |
AT4G17420:CDS:1 | 48 | Chr4: 9724396-9724443 | Arabidopsis thaliana |
AT4G17420:CDS:15 | 50 | Chr4: 9722378-9722427 | Arabidopsis thaliana |
AT4G17420:CDS:14 | 16 | Chr4: 9722521-9722536 | Arabidopsis thaliana |
AT4G17420:CDS:12 | 43 | Chr4: 9722616-9722658 | Arabidopsis thaliana |
AT4G17420:CDS:10.1 | 92 | Chr4: 9722738-9722829 | Arabidopsis thaliana |
AT4G17420:CDS:9.1 | 128 | Chr4: 9722928-9723055 | Arabidopsis thaliana |
AT4G17420:CDS:8 | 31 | Chr4: 9723139-9723169 | Arabidopsis thaliana |
AT4G17420:CDS:6.1 | 96 | Chr4: 9723345-9723440 | Arabidopsis thaliana |
AT4G17420:CDS:5.1 | 39 | Chr4: 9723524-9723562 | Arabidopsis thaliana |
AT4G17420:CDS:4.1 | 179 | Chr4: 9723687-9723865 | Arabidopsis thaliana |
AT4G17420:CDS:3.1 | 40 | Chr4: 9723955-9723994 | Arabidopsis thaliana |
AT4G17420:CDS:2.1 | 60 | Chr4: 9724083-9724142 | Arabidopsis thaliana |
AT4G17420:CDS:1.1 | 48 | Chr4: 9724396-9724443 | Arabidopsis thaliana |
AT4G17420:CDS:15.1 | 50 | Chr4: 9722378-9722427 | Arabidopsis thaliana |
AT4G17420:CDS:14.1 | 16 | Chr4: 9722521-9722536 | Arabidopsis thaliana |
AT4G17420:CDS:11 | 117 | Chr4: 9722713-9722829 | Arabidopsis thaliana |
AT4G17420:CDS:9.2 | 128 | Chr4: 9722928-9723055 | Arabidopsis thaliana |
AT4G17420:CDS:8.1 | 31 | Chr4: 9723139-9723169 | Arabidopsis thaliana |
AT4G17420:CDS:6.2 | 96 | Chr4: 9723345-9723440 | Arabidopsis thaliana |
AT4G17420:CDS:5.2 | 39 | Chr4: 9723524-9723562 | Arabidopsis thaliana |
AT4G17420:CDS:4.2 | 179 | Chr4: 9723687-9723865 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G17420:exon:16 | 305 | Chr4: 9722354-9722658 | Arabidopsis thaliana |
AT4G17420:exon:8 | 61 | Chr4: 9723139-9723199 | Arabidopsis thaliana |
AT4G17420:exon:1 | 312 | Chr4: 9724396-9724707 | Arabidopsis thaliana |
AT4G17420:exon:13 | 43 | Chr4: 9722616-9722658 | Arabidopsis thaliana |
AT4G17420:exon:11 | 92 | Chr4: 9722738-9722829 | Arabidopsis thaliana |
AT4G17420:exon:15 | 50 | Chr4: 9722378-9722427 | Arabidopsis thaliana |
AT4G17420:exon:14 | 16 | Chr4: 9722521-9722536 | Arabidopsis thaliana |
AT4G17420:exon:12 | 117 | Chr4: 9722713-9722829 | Arabidopsis thaliana |
AT4G17420:exon:10 | 128 | Chr4: 9722928-9723055 | Arabidopsis thaliana |
AT4G17420:exon:9 | 31 | Chr4: 9723139-9723169 | Arabidopsis thaliana |
AT4G17420:exon:7 | 96 | Chr4: 9723345-9723440 | Arabidopsis thaliana |
AT4G17420:exon:6 | 39 | Chr4: 9723524-9723562 | Arabidopsis thaliana |
AT4G17420:exon:5 | 179 | Chr4: 9723687-9723865 | Arabidopsis thaliana |
AT4G17420:exon:4 | 40 | Chr4: 9723955-9723994 | Arabidopsis thaliana |
AT4G17420:exon:3 | 60 | Chr4: 9724083-9724142 | Arabidopsis thaliana |
AT4G17420:exon:2 | 245 | Chr4: 9724396-9724640 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G17420:five_prime_UTR:1 | 264 | Chr4: 9724444-9724707 | Arabidopsis thaliana |
AT4G17420:five_prime_UTR:2 | 197 | Chr4: 9724444-9724640 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G17420.1 | 1312 | Chr4: 9722354-9724707 |
AT4G17420.3 | 1019 | Chr4: 9722378-9724640 |
AT4G17420.2 | 1001 | Chr4: 9722378-9724640 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G17420:three_prime_UTR:1 | 190 | Chr4: 9722354-9722543 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
endoplasmic reticulum | ECO |
Hrd1p ubiquitin ligase complex | ECO |
molecular function | |
No terms in this category. | |
biological process | |
regulation of ERAD pathway | ECO |
endoplasmic reticulum unfolded protein response | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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