External Links
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- ATTED-II
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G17150:CDS:1 | 68 | Chr4: 9638591-9638658 | Arabidopsis thaliana |
AT4G17150:CDS:2 | 82 | Chr4: 9638739-9638820 | Arabidopsis thaliana |
AT4G17150:CDS:4 | 104 | Chr4: 9638926-9639029 | Arabidopsis thaliana |
AT4G17150:CDS:5 | 127 | Chr4: 9639129-9639255 | Arabidopsis thaliana |
AT4G17150:CDS:6 | 95 | Chr4: 9639334-9639428 | Arabidopsis thaliana |
AT4G17150:CDS:7 | 124 | Chr4: 9639596-9639719 | Arabidopsis thaliana |
AT4G17150:CDS:8 | 81 | Chr4: 9639985-9640065 | Arabidopsis thaliana |
AT4G17150:CDS:9 | 99 | Chr4: 9640162-9640260 | Arabidopsis thaliana |
AT4G17150:CDS:10 | 186 | Chr4: 9640343-9640528 | Arabidopsis thaliana |
AT4G17150:CDS:12 | 198 | Chr4: 9640786-9640983 | Arabidopsis thaliana |
AT4G17150:CDS:1.1 | 68 | Chr4: 9638591-9638658 | Arabidopsis thaliana |
AT4G17150:CDS:2.1 | 82 | Chr4: 9638739-9638820 | Arabidopsis thaliana |
AT4G17150:CDS:4.1 | 104 | Chr4: 9638926-9639029 | Arabidopsis thaliana |
AT4G17150:CDS:5.1 | 127 | Chr4: 9639129-9639255 | Arabidopsis thaliana |
AT4G17150:CDS:6.1 | 95 | Chr4: 9639334-9639428 | Arabidopsis thaliana |
AT4G17150:CDS:7.1 | 124 | Chr4: 9639596-9639719 | Arabidopsis thaliana |
AT4G17150:CDS:8.1 | 81 | Chr4: 9639985-9640065 | Arabidopsis thaliana |
AT4G17150:CDS:9.1 | 99 | Chr4: 9640162-9640260 | Arabidopsis thaliana |
AT4G17150:CDS:10.1 | 186 | Chr4: 9640343-9640528 | Arabidopsis thaliana |
AT4G17150:CDS:11 | 138 | Chr4: 9640786-9640923 | Arabidopsis thaliana |
AT4G17150:CDS:13 | 57 | Chr4: 9641006-9641062 | Arabidopsis thaliana |
AT4G17150:CDS:15 | 129 | Chr4: 9641219-9641347 | Arabidopsis thaliana |
AT4G17150:CDS:16 | 219 | Chr4: 9641430-9641648 | Arabidopsis thaliana |
AT4G17150:CDS:1.2 | 68 | Chr4: 9638591-9638658 | Arabidopsis thaliana |
AT4G17150:CDS:2.2 | 82 | Chr4: 9638739-9638820 | Arabidopsis thaliana |
AT4G17150:CDS:4.2 | 104 | Chr4: 9638926-9639029 | Arabidopsis thaliana |
AT4G17150:CDS:5.2 | 127 | Chr4: 9639129-9639255 | Arabidopsis thaliana |
AT4G17150:CDS:6.2 | 95 | Chr4: 9639334-9639428 | Arabidopsis thaliana |
AT4G17150:CDS:7.2 | 124 | Chr4: 9639596-9639719 | Arabidopsis thaliana |
AT4G17150:CDS:8.2 | 81 | Chr4: 9639985-9640065 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G17150:exon:15 | 562 | Chr4: 9640786-9641347 | Arabidopsis thaliana |
AT4G17150:exon:1 | 696 | Chr4: 9637963-9638658 | Arabidopsis thaliana |
AT4G17150:exon:20 | 441 | Chr4: 9641430-9641870 | Arabidopsis thaliana |
AT4G17150:exon:2 | 649 | Chr4: 9638010-9638658 | Arabidopsis thaliana |
AT4G17150:exon:17 | 342 | Chr4: 9641006-9641347 | Arabidopsis thaliana |
AT4G17150:exon:19 | 439 | Chr4: 9641430-9641868 | Arabidopsis thaliana |
AT4G17150:exon:5 | 86 | Chr4: 9638739-9638824 | Arabidopsis thaliana |
AT4G17150:exon:13 | 138 | Chr4: 9640786-9640923 | Arabidopsis thaliana |
AT4G17150:exon:16 | 57 | Chr4: 9641006-9641062 | Arabidopsis thaliana |
AT4G17150:exon:21 | 564 | Chr4: 9641430-9641993 | Arabidopsis thaliana |
AT4G17150:exon:3 | 632 | Chr4: 9638027-9638658 | Arabidopsis thaliana |
AT4G17150:exon:4 | 82 | Chr4: 9638739-9638820 | Arabidopsis thaliana |
AT4G17150:exon:6 | 104 | Chr4: 9638926-9639029 | Arabidopsis thaliana |
AT4G17150:exon:7 | 127 | Chr4: 9639129-9639255 | Arabidopsis thaliana |
AT4G17150:exon:8 | 95 | Chr4: 9639334-9639428 | Arabidopsis thaliana |
AT4G17150:exon:9 | 124 | Chr4: 9639596-9639719 | Arabidopsis thaliana |
AT4G17150:exon:10 | 81 | Chr4: 9639985-9640065 | Arabidopsis thaliana |
AT4G17150:exon:11 | 99 | Chr4: 9640162-9640260 | Arabidopsis thaliana |
AT4G17150:exon:12 | 186 | Chr4: 9640343-9640528 | Arabidopsis thaliana |
AT4G17150:exon:14 | 277 | Chr4: 9640786-9641062 | Arabidopsis thaliana |
AT4G17150:exon:18 | 129 | Chr4: 9641219-9641347 | Arabidopsis thaliana |
AT4G17150:exon:22 | 565 | Chr4: 9641430-9641994 | Arabidopsis thaliana |
AT4G17160:exon:5 | 265 | Chr4: 9641859-9642123 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G17150:five_prime_UTR:1 | 628 | Chr4: 9637963-9638590 | Arabidopsis thaliana |
AT4G17150:five_prime_UTR:2 | 581 | Chr4: 9638010-9638590 | Arabidopsis thaliana |
AT4G17150:five_prime_UTR:4 | 632 | Chr4: 9638027-9638658 | Arabidopsis thaliana |
AT4G17150:five_prime_UTR:5 | 8 | Chr4: 9638739-9638746 | Arabidopsis thaliana |
AT4G17150:five_prime_UTR:3 | 564 | Chr4: 9638027-9638590 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G17160 | locus:2130614 | RABB1a | RAB GTPase homolog B1A | 1880 | Chr4: 9641859-9643738 | A. thaliana | RAB GTPase homolog B1A;(source:Araport11) | NULL | RAB GTPase homolog B1A | ATRAB2B, ATRABB1A, RABB1a |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G17150.3 | 2597 | Chr4: 9637963-9641870 |
AT4G17150.1 | 2359 | Chr4: 9637963-9641870 |
AT4G17150.4 | 2466 | Chr4: 9638010-9641868 |
AT4G17150.5 | 2422 | Chr4: 9638027-9641993 |
AT4G17150.2 | 2501 | Chr4: 9638027-9641994 |
AT4G17160.1 | 936 | Chr4: 9641859-9643738 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G17150:three_prime_UTR:2 | 364 | Chr4: 9640984-9641347 | Arabidopsis thaliana |
AT4G17150:three_prime_UTR:6 | 441 | Chr4: 9641430-9641870 | Arabidopsis thaliana |
AT4G17150:three_prime_UTR:8 | 222 | Chr4: 9641649-9641870 | Arabidopsis thaliana |
AT4G17150:three_prime_UTR:3 | 204 | Chr4: 9641144-9641347 | Arabidopsis thaliana |
AT4G17150:three_prime_UTR:5 | 439 | Chr4: 9641430-9641868 | Arabidopsis thaliana |
AT4G17150:three_prime_UTR:9 | 345 | Chr4: 9641649-9641993 | Arabidopsis thaliana |
AT4G17150:three_prime_UTR:1 | 79 | Chr4: 9640984-9641062 | Arabidopsis thaliana |
AT4G17150:three_prime_UTR:4 | 129 | Chr4: 9641219-9641347 | Arabidopsis thaliana |
AT4G17150:three_prime_UTR:7 | 565 | Chr4: 9641430-9641994 | Arabidopsis thaliana |
AT4G17160:three_prime_UTR:1 | 121 | Chr4: 9641859-9641979 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...