External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 19, Exons: 14, Five Prime UTRs: 2, mRNAs: 3, Three Prime UTRs: 2, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G16900:CDS:11 | 215 | Chr4: 9512329-9512543 | Arabidopsis thaliana |
AT4G16900:CDS:10 | 125 | Chr4: 9512648-9512772 | Arabidopsis thaliana |
AT4G16900:CDS:9 | 76 | Chr4: 9512853-9512928 | Arabidopsis thaliana |
AT4G16900:CDS:7 | 589 | Chr4: 9512993-9513581 | Arabidopsis thaliana |
AT4G16900:CDS:6 | 149 | Chr4: 9513805-9513953 | Arabidopsis thaliana |
AT4G16900:CDS:4 | 235 | Chr4: 9514046-9514280 | Arabidopsis thaliana |
AT4G16900:CDS:3 | 281 | Chr4: 9514398-9514678 | Arabidopsis thaliana |
AT4G16900:CDS:2 | 986 | Chr4: 9514954-9515939 | Arabidopsis thaliana |
AT4G16900:CDS:1 | 467 | Chr4: 9516075-9516541 | Arabidopsis thaliana |
AT4G16900:CDS:8 | 600 | Chr4: 9512982-9513581 | Arabidopsis thaliana |
AT4G16900:CDS:6.1 | 149 | Chr4: 9513805-9513953 | Arabidopsis thaliana |
AT4G16900:CDS:4.1 | 235 | Chr4: 9514046-9514280 | Arabidopsis thaliana |
AT4G16900:CDS:3.1 | 281 | Chr4: 9514398-9514678 | Arabidopsis thaliana |
AT4G16900:CDS:2.1 | 986 | Chr4: 9514954-9515939 | Arabidopsis thaliana |
AT4G16900:CDS:1.1 | 467 | Chr4: 9516075-9516541 | Arabidopsis thaliana |
AT4G16900:CDS:5 | 327 | Chr4: 9513954-9514280 | Arabidopsis thaliana |
AT4G16900:CDS:3.2 | 281 | Chr4: 9514398-9514678 | Arabidopsis thaliana |
AT4G16900:CDS:2.2 | 986 | Chr4: 9514954-9515939 | Arabidopsis thaliana |
AT4G16900:CDS:1.2 | 467 | Chr4: 9516075-9516541 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G16900:exon:14 | 183 | Chr4: 9511859-9512041 | Arabidopsis thaliana |
AT4G16900:exon:13 | 426 | Chr4: 9512118-9512543 | Arabidopsis thaliana |
AT4G16900:exon:12 | 125 | Chr4: 9512648-9512772 | Arabidopsis thaliana |
AT4G16900:exon:11 | 76 | Chr4: 9512853-9512928 | Arabidopsis thaliana |
AT4G16900:exon:9 | 589 | Chr4: 9512993-9513581 | Arabidopsis thaliana |
AT4G16900:exon:2 | 528 | Chr4: 9516075-9516602 | Arabidopsis thaliana |
AT4G16900:exon:10 | 600 | Chr4: 9512982-9513581 | Arabidopsis thaliana |
AT4G16900:exon:8 | 149 | Chr4: 9513805-9513953 | Arabidopsis thaliana |
AT4G16900:exon:6 | 235 | Chr4: 9514046-9514280 | Arabidopsis thaliana |
AT4G16900:exon:3 | 467 | Chr4: 9516075-9516541 | Arabidopsis thaliana |
AT4G16900:exon:7 | 327 | Chr4: 9513954-9514280 | Arabidopsis thaliana |
AT4G16900:exon:5 | 281 | Chr4: 9514398-9514678 | Arabidopsis thaliana |
AT4G16900:exon:4 | 986 | Chr4: 9514954-9515939 | Arabidopsis thaliana |
AT4G16900:exon:1 | 614 | Chr4: 9516075-9516688 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G16900:five_prime_UTR:2 | 61 | Chr4: 9516542-9516602 | Arabidopsis thaliana |
AT4G16900:five_prime_UTR:1 | 147 | Chr4: 9516542-9516688 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G16900.1 | 3578 | Chr4: 9511859-9516602 |
AT4G16900.2 | 2718 | Chr4: 9512982-9516541 |
AT4G16900.3 | 2208 | Chr4: 9513954-9516688 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G16900:three_prime_UTR:2 | 183 | Chr4: 9511859-9512041 | Arabidopsis thaliana |
AT4G16900:three_prime_UTR:1 | 211 | Chr4: 9512118-9512328 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE42950 | 4605 | Chr4: 9508382-9512986 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE42950:transposon_fragment:1 | 1238 | Chr4: 9511749-9512986 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
ADP binding | ECO |
biological process | |
defense response | ECO |
signal transduction | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...