External Links
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G16535:CDS:1 | 752 | Chr4: 9313721-9314472 | Arabidopsis thaliana |
AT4G16535:CDS:2 | 7 | Chr4: 9315548-9315554 | Arabidopsis thaliana |
AT4G16540:CDS:6 | 92 | Chr4: 9316322-9316413 | Arabidopsis thaliana |
AT4G16540:CDS:4 | 27 | Chr4: 9316551-9316577 | Arabidopsis thaliana |
AT4G16540:CDS:2 | 348 | Chr4: 9316669-9317016 | Arabidopsis thaliana |
AT4G16540:CDS:1 | 37 | Chr4: 9317117-9317153 | Arabidopsis thaliana |
AT4G16540:CDS:6.1 | 92 | Chr4: 9316322-9316413 | Arabidopsis thaliana |
AT4G16540:CDS:4.1 | 27 | Chr4: 9316551-9316577 | Arabidopsis thaliana |
AT4G16540:CDS:2.1 | 348 | Chr4: 9316669-9317016 | Arabidopsis thaliana |
AT4G16540:CDS:1.1 | 37 | Chr4: 9317117-9317153 | Arabidopsis thaliana |
AT4G16540:CDS:7 | 246 | Chr4: 9316023-9316268 | Arabidopsis thaliana |
AT4G16540:CDS:3 | 68 | Chr4: 9316551-9316618 | Arabidopsis thaliana |
AT4G16540:CDS:2.2 | 348 | Chr4: 9316669-9317016 | Arabidopsis thaliana |
AT4G16540:CDS:1.2 | 37 | Chr4: 9317117-9317153 | Arabidopsis thaliana |
AT4G16540:CDS:8 | 215 | Chr4: 9316023-9316237 | Arabidopsis thaliana |
AT4G16540:CDS:5 | 24 | Chr4: 9316390-9316413 | Arabidopsis thaliana |
AT4G16540:CDS:4.2 | 27 | Chr4: 9316551-9316577 | Arabidopsis thaliana |
AT4G16540:CDS:2.3 | 348 | Chr4: 9316669-9317016 | Arabidopsis thaliana |
AT4G16540:CDS:1.3 | 37 | Chr4: 9317117-9317153 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G16535:exon:1 | 881 | Chr4: 9313592-9314472 | Arabidopsis thaliana |
AT4G16535:exon:2 | 225 | Chr4: 9315548-9315772 | Arabidopsis thaliana |
AT4G16540:exon:12 | 1326 | Chr4: 9313602-9314927 | Arabidopsis thaliana |
AT4G16540:exon:11 | 752 | Chr4: 9315662-9316413 | Arabidopsis thaliana |
AT4G16540:exon:1 | 146 | Chr4: 9317117-9317262 | Arabidopsis thaliana |
AT4G16540:exon:10 | 576 | Chr4: 9315838-9316413 | Arabidopsis thaliana |
AT4G16540:exon:9 | 369 | Chr4: 9315900-9316268 | Arabidopsis thaliana |
AT4G16540:exon:5 | 68 | Chr4: 9316551-9316618 | Arabidopsis thaliana |
AT4G16540:exon:3 | 37 | Chr4: 9317117-9317153 | Arabidopsis thaliana |
AT4G16540:exon:8 | 215 | Chr4: 9316023-9316237 | Arabidopsis thaliana |
AT4G16540:exon:7 | 24 | Chr4: 9316390-9316413 | Arabidopsis thaliana |
AT4G16540:exon:6 | 27 | Chr4: 9316551-9316577 | Arabidopsis thaliana |
AT4G16540:exon:4 | 348 | Chr4: 9316669-9317016 | Arabidopsis thaliana |
AT4G16540:exon:2 | 79 | Chr4: 9317117-9317195 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G16535:five_prime_UTR:1 | 129 | Chr4: 9313592-9313720 | Arabidopsis thaliana |
AT4G16540:five_prime_UTR:1 | 109 | Chr4: 9317154-9317262 | Arabidopsis thaliana |
AT4G16540:five_prime_UTR:2 | 42 | Chr4: 9317154-9317195 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G16535 | AT4G16535 | 2181 | Chr4: 9313592-9315772 | A. thaliana | leukocyte receptor cluster-like protein;(source:Araport11) | Encodes a protein of unknown function that is involved in negative regulation of JA and ET signaling pathways. | NULL | JAH3 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G16535.1 | 1106 | Chr4: 9313592-9315772 |
AT4G16540.2 | 2599 | Chr4: 9313602-9317262 |
AT4G16540.3 | 1030 | Chr4: 9315838-9317195 |
AT4G16540.1 | 822 | Chr4: 9315900-9317153 |
AT4G16540.4 | 693 | Chr4: 9316023-9317195 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G16535:three_prime_UTR:1 | 218 | Chr4: 9315555-9315772 | Arabidopsis thaliana |
AT4G16540:three_prime_UTR:4 | 1326 | Chr4: 9313602-9314927 | Arabidopsis thaliana |
AT4G16540:three_prime_UTR:3 | 660 | Chr4: 9315662-9316321 | Arabidopsis thaliana |
AT4G16540:three_prime_UTR:2 | 484 | Chr4: 9315838-9316321 | Arabidopsis thaliana |
AT4G16540:three_prime_UTR:1 | 123 | Chr4: 9315900-9316022 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
O23498_ARATH | similarity | Belongs to the small heat shock protein (HSP20) family. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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