External Links
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G16510:CDS:1 | 309 | Chr4: 9302816-9303124 | Arabidopsis thaliana |
AT4G16510:CDS:3 | 78 | Chr4: 9303275-9303352 | Arabidopsis thaliana |
AT4G16510:CDS:4 | 85 | Chr4: 9303438-9303522 | Arabidopsis thaliana |
AT4G16510:CDS:5 | 89 | Chr4: 9303617-9303705 | Arabidopsis thaliana |
AT4G16510:CDS:6 | 138 | Chr4: 9304732-9304869 | Arabidopsis thaliana |
AT4G16510:CDS:2 | 66 | Chr4: 9303048-9303113 | Arabidopsis thaliana |
AT4G16510:CDS:3.1 | 78 | Chr4: 9303275-9303352 | Arabidopsis thaliana |
AT4G16510:CDS:4.1 | 85 | Chr4: 9303438-9303522 | Arabidopsis thaliana |
AT4G16510:CDS:5.1 | 89 | Chr4: 9303617-9303705 | Arabidopsis thaliana |
AT4G16510:CDS:6.1 | 138 | Chr4: 9304732-9304869 | Arabidopsis thaliana |
AT4G16515:CDS:1 | 444 | Chr4: 9305386-9305829 | Arabidopsis thaliana |
AT4G16515:CDS:2 | 261 | Chr4: 9305386-9305646 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G16510:exon:1 | 523 | Chr4: 9302602-9303124 | Arabidopsis thaliana |
AT4G16510:exon:7 | 1107 | Chr4: 9304732-9305838 | Arabidopsis thaliana |
AT4G16510:exon:2 | 496 | Chr4: 9302618-9303113 | Arabidopsis thaliana |
AT4G16510:exon:3 | 78 | Chr4: 9303275-9303352 | Arabidopsis thaliana |
AT4G16510:exon:4 | 85 | Chr4: 9303438-9303522 | Arabidopsis thaliana |
AT4G16510:exon:5 | 89 | Chr4: 9303617-9303705 | Arabidopsis thaliana |
AT4G16510:exon:6 | 420 | Chr4: 9304732-9305151 | Arabidopsis thaliana |
AT4G16515:exon:2 | 680 | Chr4: 9305166-9305845 | Arabidopsis thaliana |
AT4G16515:exon:1 | 578 | Chr4: 9305186-9305763 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G16510:five_prime_UTR:1 | 214 | Chr4: 9302602-9302815 | Arabidopsis thaliana |
AT4G16510:five_prime_UTR:2 | 430 | Chr4: 9302618-9303047 | Arabidopsis thaliana |
AT4G16515:five_prime_UTR:1 | 16 | Chr4: 9305830-9305845 | Arabidopsis thaliana |
AT4G16515:five_prime_UTR:2 | 117 | Chr4: 9305647-9305763 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G16515 | locus:505006482 | RGF6 | root meristem growth factor 6 | 680 | Chr4: 9305166-9305845 | A. thaliana | root meristem growth factor;(source:Araport11) | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). | NULL | CLEL 6, GLV1, RGF6 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G16510.1 | 1882 | Chr4: 9302602-9305838 |
AT4G16510.2 | 1168 | Chr4: 9302618-9305151 |
AT4G16515.2 | 680 | Chr4: 9305166-9305845 |
AT4G16515.1 | 578 | Chr4: 9305186-9305763 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G16510:three_prime_UTR:2 | 969 | Chr4: 9304870-9305838 | Arabidopsis thaliana |
AT4G16510:three_prime_UTR:1 | 282 | Chr4: 9304870-9305151 | Arabidopsis thaliana |
AT4G16515:three_prime_UTR:2 | 220 | Chr4: 9305166-9305385 | Arabidopsis thaliana |
AT4G16515:three_prime_UTR:1 | 200 | Chr4: 9305186-9305385 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
aminoacyl-tRNA editing activity | ECO |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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