help  | faq  | software  | BAR
Hide

Oops!

Error: 403
Hide Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.

Gene : LDL3 A. thaliana

DB identifier  ? AT4G16310 Secondary Identifier  ? locus:2130454
Name  ? LSD1-like 3 Brief Description  LSD1-like 3
TAIR Computational Description  LSD1-like 3;(source:Araport11)
TAIR Curator Summary  FAD-dependent lysine-specific histone demethylase involved in the control of flowering time.
TAIR Short Description  LSD1-like 3
TAIR Aliases  LDL3

1 Gene Rifs

1 Organism

6 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 8293  
Location: Chr4:9217988-9226280

Gene models - LDL3 AT4G16310

? Gene models

Transcripts: 5  Exons: 49  Introns: 44 

Overlapping Features

? Genome features that overlap coordinates of this Gene

23 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
LDL3_ARATH LDL3_ARATH-2 function Probable histone demethylase that reduces the levels of histone H3 'Lys-4' methylation in chromatin.
LDL3_ARATH LDL3_ARATH-2 similarity Belongs to the flavin monoamine oxidase family.

2 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
oxidoreductase activity  ? ECO  
biological process
chromatin organization  ? ECO  

Interactions

Interaction Network

Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


11 Homologues

 

Other

8 Data Sets