Lists
This Gene is in one list:
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 76, Exons: 27, Five Prime UTRs: 6, mRNAs: 4, Three Prime UTRs: 4, Transposable Elements: 2, Transposon Fragments: 2
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G15570:CDS:4 | 120 | Chr4: 8893608-8893727 | Arabidopsis thaliana |
AT4G15570:CDS:5 | 222 | Chr4: 8893861-8894082 | Arabidopsis thaliana |
AT4G15570:CDS:6 | 192 | Chr4: 8894355-8894546 | Arabidopsis thaliana |
AT4G15570:CDS:7 | 36 | Chr4: 8894639-8894674 | Arabidopsis thaliana |
AT4G15570:CDS:8 | 86 | Chr4: 8895068-8895153 | Arabidopsis thaliana |
AT4G15570:CDS:9 | 51 | Chr4: 8895263-8895313 | Arabidopsis thaliana |
AT4G15570:CDS:10 | 112 | Chr4: 8895557-8895668 | Arabidopsis thaliana |
AT4G15570:CDS:11 | 106 | Chr4: 8895768-8895873 | Arabidopsis thaliana |
AT4G15570:CDS:12 | 98 | Chr4: 8895954-8896051 | Arabidopsis thaliana |
AT4G15570:CDS:13 | 102 | Chr4: 8896290-8896391 | Arabidopsis thaliana |
AT4G15570:CDS:14 | 93 | Chr4: 8896483-8896575 | Arabidopsis thaliana |
AT4G15570:CDS:15 | 54 | Chr4: 8896926-8896979 | Arabidopsis thaliana |
AT4G15570:CDS:16 | 59 | Chr4: 8897258-8897316 | Arabidopsis thaliana |
AT4G15570:CDS:17 | 85 | Chr4: 8897423-8897507 | Arabidopsis thaliana |
AT4G15570:CDS:18 | 372 | Chr4: 8897695-8898066 | Arabidopsis thaliana |
AT4G15570:CDS:19 | 123 | Chr4: 8898241-8898363 | Arabidopsis thaliana |
AT4G15570:CDS:20 | 87 | Chr4: 8898484-8898570 | Arabidopsis thaliana |
AT4G15570:CDS:21 | 192 | Chr4: 8898667-8898858 | Arabidopsis thaliana |
AT4G15570:CDS:1 | 108 | Chr4: 8893043-8893150 | Arabidopsis thaliana |
AT4G15570:CDS:2 | 145 | Chr4: 8893242-8893386 | Arabidopsis thaliana |
AT4G15570:CDS:3 | 134 | Chr4: 8893594-8893727 | Arabidopsis thaliana |
AT4G15570:CDS:5.1 | 222 | Chr4: 8893861-8894082 | Arabidopsis thaliana |
AT4G15570:CDS:6.1 | 192 | Chr4: 8894355-8894546 | Arabidopsis thaliana |
AT4G15570:CDS:7.1 | 36 | Chr4: 8894639-8894674 | Arabidopsis thaliana |
AT4G15570:CDS:8.1 | 86 | Chr4: 8895068-8895153 | Arabidopsis thaliana |
AT4G15570:CDS:9.1 | 51 | Chr4: 8895263-8895313 | Arabidopsis thaliana |
AT4G15570:CDS:10.1 | 112 | Chr4: 8895557-8895668 | Arabidopsis thaliana |
AT4G15570:CDS:11.1 | 106 | Chr4: 8895768-8895873 | Arabidopsis thaliana |
AT4G15570:CDS:12.1 | 98 | Chr4: 8895954-8896051 | Arabidopsis thaliana |
AT4G15570:CDS:13.1 | 102 | Chr4: 8896290-8896391 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G15570:exon:5 | 486 | Chr4: 8893242-8893727 | Arabidopsis thaliana |
AT4G15570:exon:25 | 337 | Chr4: 8898667-8899003 | Arabidopsis thaliana |
AT4G15570:exon:1 | 60 | Chr4: 8892607-8892666 | Arabidopsis thaliana |
AT4G15570:exon:3 | 156 | Chr4: 8892995-8893150 | Arabidopsis thaliana |
AT4G15570:exon:27 | 395 | Chr4: 8898667-8899061 | Arabidopsis thaliana |
AT4G15570:exon:2 | 179 | Chr4: 8892972-8893150 | Arabidopsis thaliana |
AT4G15570:exon:4 | 145 | Chr4: 8893242-8893386 | Arabidopsis thaliana |
AT4G15570:exon:7 | 134 | Chr4: 8893594-8893727 | Arabidopsis thaliana |
AT4G15570:exon:26 | 373 | Chr4: 8898667-8899039 | Arabidopsis thaliana |
AT4G15570:exon:6 | 173 | Chr4: 8893555-8893727 | Arabidopsis thaliana |
AT4G15570:exon:8 | 222 | Chr4: 8893861-8894082 | Arabidopsis thaliana |
AT4G15570:exon:9 | 192 | Chr4: 8894355-8894546 | Arabidopsis thaliana |
AT4G15570:exon:10 | 36 | Chr4: 8894639-8894674 | Arabidopsis thaliana |
AT4G15570:exon:11 | 86 | Chr4: 8895068-8895153 | Arabidopsis thaliana |
AT4G15570:exon:12 | 51 | Chr4: 8895263-8895313 | Arabidopsis thaliana |
AT4G15570:exon:13 | 112 | Chr4: 8895557-8895668 | Arabidopsis thaliana |
AT4G15570:exon:14 | 106 | Chr4: 8895768-8895873 | Arabidopsis thaliana |
AT4G15570:exon:15 | 98 | Chr4: 8895954-8896051 | Arabidopsis thaliana |
AT4G15570:exon:16 | 102 | Chr4: 8896290-8896391 | Arabidopsis thaliana |
AT4G15570:exon:17 | 93 | Chr4: 8896483-8896575 | Arabidopsis thaliana |
AT4G15570:exon:18 | 54 | Chr4: 8896926-8896979 | Arabidopsis thaliana |
AT4G15570:exon:19 | 59 | Chr4: 8897258-8897316 | Arabidopsis thaliana |
AT4G15570:exon:20 | 85 | Chr4: 8897423-8897507 | Arabidopsis thaliana |
AT4G15570:exon:21 | 372 | Chr4: 8897695-8898066 | Arabidopsis thaliana |
AT4G15570:exon:22 | 123 | Chr4: 8898241-8898363 | Arabidopsis thaliana |
AT4G15570:exon:23 | 87 | Chr4: 8898484-8898570 | Arabidopsis thaliana |
AT4G15570:exon:24 | 333 | Chr4: 8898667-8898999 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G15570:five_prime_UTR:4 | 156 | Chr4: 8892995-8893150 | Arabidopsis thaliana |
AT4G15570:five_prime_UTR:5 | 366 | Chr4: 8893242-8893607 | Arabidopsis thaliana |
AT4G15570:five_prime_UTR:1 | 60 | Chr4: 8892607-8892666 | Arabidopsis thaliana |
AT4G15570:five_prime_UTR:3 | 48 | Chr4: 8892995-8893042 | Arabidopsis thaliana |
AT4G15570:five_prime_UTR:2 | 71 | Chr4: 8892972-8893042 | Arabidopsis thaliana |
AT4G15570:five_prime_UTR:6 | 53 | Chr4: 8893555-8893607 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G15570.2 | 2917 | Chr4: 8892607-8899003 |
AT4G15570.1 | 2768 | Chr4: 8892607-8899061 |
AT4G15570.3 | 2709 | Chr4: 8892972-8899039 |
AT4G15570.4 | 2384 | Chr4: 8893555-8898999 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G15570:three_prime_UTR:2 | 145 | Chr4: 8898859-8899003 | Arabidopsis thaliana |
AT4G15570:three_prime_UTR:4 | 203 | Chr4: 8898859-8899061 | Arabidopsis thaliana |
AT4G15570:three_prime_UTR:3 | 181 | Chr4: 8898859-8899039 | Arabidopsis thaliana |
AT4G15570:three_prime_UTR:1 | 141 | Chr4: 8898859-8898999 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE39790 | 170 | Chr4: 8898872-8899041 | Arabidopsis thaliana |
AT4TE39795 | 36 | Chr4: 8899042-8899077 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE39790:transposon_fragment:1 | 170 | Chr4: 8898872-8899041 | Arabidopsis thaliana |
AT4TE39795:transposon_fragment:1 | 36 | Chr4: 8899042-8899077 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
MAA3_ARATH | function | Probable helicase that may regulate RNA molecules involved in nucleolar organization and pollen tube guidance. |
MAA3_ARATH | similarity | Belongs to the helicase family. |
MAA3_ARATH | tissue specificity | Expressed in flowers, siliques, leaves, roots and shoot apex. |
Function
Gene Ontology
cellular component | |
---|---|
nucleus | ECO |
molecular function | |
ATP binding | ECO |
helicase activity | ECO |
hydrolase activity | ECO |
biological process | |
pollen tube guidance | ECO |
embryo sac development | ECO |
pollen-pistil interaction | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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