Genomics
Genome feature
| Region: |
gene
|
Length: |
4537
 |
| Location: | Chr4:8495701-8500237 reverse strand | ||
Overlapping Features
Genome features that overlap coordinates of this Gene
Proteins
Curated comments from UniProt
| Type | Comment | Proteins |
|---|---|---|
| SUV3M_ARATH | function | Major helicase player in mitochondrial RNA metabolism. Component of the mitochondrial degradosome (mtEXO) complex, that degrades 3' overhang double-stranded RNA with a 3'-to-5' directionality in an ATP-dependent manner. ATPase and ATP-dependent multisubstrate helicase, able to unwind double-stranded (ds) DNA and RNA, and RNA/DNA heteroduplexes in the 5'-to-3' direction. Plays a role in the RNA surveillance system in mitochondria; regulates the stability of mature mRNAs, the removal of aberrantly formed mRNAs and the rapid degradation of non coding processing intermediates (By similarity). Required during pollen development (PubMed:19237690). |
| SUV3M_ARATH | similarity | Belongs to the DExH box helicase family. |
| SUV3M_ARATH | tissue specificity | Weakly expressed. |
Function
Gene Ontology
| cellular component | |
|---|---|
|
mitochondrial nucleoid
|
ECO |
|
nucleus
|
ECO |
|
mitochondrion
|
ECO |
| molecular function | |
|
ATP binding
|
ECO |
|
ATP hydrolysis activity
|
ECO |
|
RNA helicase activity
|
ECO |
|
DNA helicase activity
|
ECO |
|
RNA binding
|
ECO |
| biological process | |
|
pollen development
|
ECO |
|
positive regulation of cytokinin-activated signaling pathway
|
ECO |
|
positive regulation of gibberellic acid mediated signaling pathway
|
ECO |
|
positive regulation of auxin mediated signaling pathway
|
ECO |
|
response to salt stress
|
ECO |
|
positive regulation of response to water deprivation
|
ECO |
|
positive regulation of response to salt stress
|
ECO |
|
megagametogenesis
|
ECO |
|
RNA metabolic process
|
ECO |
Interactions
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