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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G14520:CDS:1 | 603 | Chr4: 8342471-8343073 | Arabidopsis thaliana |
AT4G14520:CDS:1.1 | 603 | Chr4: 8342471-8343073 | Arabidopsis thaliana |
AT4G14520:CDS:1.2 | 603 | Chr4: 8342471-8343073 | Arabidopsis thaliana |
AT4G14520:CDS:1.3 | 603 | Chr4: 8342471-8343073 | Arabidopsis thaliana |
AT4G14520:CDS:1.4 | 603 | Chr4: 8342471-8343073 | Arabidopsis thaliana |
AT4G14520:CDS:1.5 | 603 | Chr4: 8342471-8343073 | Arabidopsis thaliana |
AT4G14520:CDS:1.6 | 603 | Chr4: 8342471-8343073 | Arabidopsis thaliana |
AT4G14520:CDS:1.7 | 603 | Chr4: 8342471-8343073 | Arabidopsis thaliana |
AT4G14520:CDS:1.8 | 603 | Chr4: 8342471-8343073 | Arabidopsis thaliana |
AT4G14520:CDS:1.9 | 603 | Chr4: 8342471-8343073 | Arabidopsis thaliana |
AT4G14520:CDS:1.10 | 603 | Chr4: 8342471-8343073 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G14520:exon:8 | 1323 | Chr4: 8341936-8343258 | Arabidopsis thaliana |
AT4G14520:exon:11 | 1061 | Chr4: 8342198-8343258 | Arabidopsis thaliana |
AT4G14520:exon:1 | 235 | Chr4: 8341244-8341478 | Arabidopsis thaliana |
AT4G14520:exon:7 | 303 | Chr4: 8341936-8342238 | Arabidopsis thaliana |
AT4G14520:exon:2 | 995 | Chr4: 8341244-8342238 | Arabidopsis thaliana |
AT4G14520:exon:14 | 805 | Chr4: 8342454-8343258 | Arabidopsis thaliana |
AT4G14520:exon:3 | 167 | Chr4: 8341312-8341478 | Arabidopsis thaliana |
AT4G14520:exon:6 | 110 | Chr4: 8341936-8342045 | Arabidopsis thaliana |
AT4G14520:exon:13 | 796 | Chr4: 8342454-8343249 | Arabidopsis thaliana |
AT4G14520:exon:12 | 788 | Chr4: 8342454-8343241 | Arabidopsis thaliana |
AT4G14520:exon:4 | 144 | Chr4: 8341335-8341478 | Arabidopsis thaliana |
AT4G14520:exon:10 | 1044 | Chr4: 8342198-8343241 | Arabidopsis thaliana |
AT4G14520:exon:5 | 711 | Chr4: 8341335-8342045 | Arabidopsis thaliana |
AT4G14520:exon:9 | 41 | Chr4: 8342198-8342238 | Arabidopsis thaliana |
AT4G14520:exon:15 | 809 | Chr4: 8342454-8343262 | Arabidopsis thaliana |
AT4G14530:exon:1 | 961 | Chr4: 8343239-8344199 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G14520:five_prime_UTR:8 | 535 | Chr4: 8341936-8342470 | Arabidopsis thaliana |
AT4G14520:five_prime_UTR:1 | 235 | Chr4: 8341244-8341478 | Arabidopsis thaliana |
AT4G14520:five_prime_UTR:7 | 303 | Chr4: 8341936-8342238 | Arabidopsis thaliana |
AT4G14520:five_prime_UTR:2 | 995 | Chr4: 8341244-8342238 | Arabidopsis thaliana |
AT4G14520:five_prime_UTR:3 | 167 | Chr4: 8341312-8341478 | Arabidopsis thaliana |
AT4G14520:five_prime_UTR:6 | 110 | Chr4: 8341936-8342045 | Arabidopsis thaliana |
AT4G14520:five_prime_UTR:4 | 144 | Chr4: 8341335-8341478 | Arabidopsis thaliana |
AT4G14520:five_prime_UTR:10 | 273 | Chr4: 8342198-8342470 | Arabidopsis thaliana |
AT4G14520:five_prime_UTR:5 | 711 | Chr4: 8341335-8342045 | Arabidopsis thaliana |
AT4G14520:five_prime_UTR:9 | 41 | Chr4: 8342198-8342238 | Arabidopsis thaliana |
AT4G14520:five_prime_UTR:11 | 17 | Chr4: 8342454-8342470 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G14530 | locus:2129870 | AT4G14530 | 961 | Chr4: 8343239-8344199 | A. thaliana | agamous-like MADS-box protein;(source:Araport11) | NULL | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G14520.2 | 1040 | Chr4: 8341244-8343258 |
AT4G14520.5 | 1558 | Chr4: 8341244-8343258 |
AT4G14520.3 | 1191 | Chr4: 8341244-8343258 |
AT4G14520.1 | 1081 | Chr4: 8341244-8343258 |
AT4G14520.6 | 1406 | Chr4: 8341244-8343258 |
AT4G14520.7 | 1343 | Chr4: 8341244-8343258 |
AT4G14520.4 | 1800 | Chr4: 8341244-8343258 |
AT4G14520.8 | 1073 | Chr4: 8341312-8343249 |
AT4G14520.10 | 1499 | Chr4: 8341335-8343241 |
AT4G14520.11 | 1188 | Chr4: 8341335-8343241 |
AT4G14520.9 | 1561 | Chr4: 8341335-8343262 |
AT4G14530.1 | 961 | Chr4: 8343239-8344199 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G14520:three_prime_UTR:3 | 185 | Chr4: 8343074-8343258 | Arabidopsis thaliana |
AT4G14520:three_prime_UTR:2 | 176 | Chr4: 8343074-8343249 | Arabidopsis thaliana |
AT4G14520:three_prime_UTR:1 | 168 | Chr4: 8343074-8343241 | Arabidopsis thaliana |
AT4G14520:three_prime_UTR:4 | 189 | Chr4: 8343074-8343262 | Arabidopsis thaliana |
AT4G14530:three_prime_UTR:1 | 237 | Chr4: 8343239-8343475 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
RPB7L_ARATH | similarity | Belongs to the eukaryotic RPB7/RPC8 RNA polymerase subunit family. |
Function
Gene Ontology
cellular component | |
---|---|
DNA-directed RNA polymerase complex | ECO |
nucleus | ECO |
molecular function | |
nucleic acid binding | ECO |
biological process | |
DNA-templated transcription initiation | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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