External Links
- Aracyc
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- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
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- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G13960:CDS:5 | 342 | Chr4: 8060681-8061022 | Arabidopsis thaliana |
AT4G13960:CDS:4 | 141 | Chr4: 8061105-8061245 | Arabidopsis thaliana |
AT4G13960:CDS:2 | 912 | Chr4: 8061320-8062231 | Arabidopsis thaliana |
AT4G13960:CDS:5.1 | 342 | Chr4: 8060681-8061022 | Arabidopsis thaliana |
AT4G13960:CDS:4.1 | 141 | Chr4: 8061105-8061245 | Arabidopsis thaliana |
AT4G13960:CDS:2.1 | 912 | Chr4: 8061320-8062231 | Arabidopsis thaliana |
AT4G13960:CDS:5.2 | 342 | Chr4: 8060681-8061022 | Arabidopsis thaliana |
AT4G13960:CDS:4.2 | 141 | Chr4: 8061105-8061245 | Arabidopsis thaliana |
AT4G13960:CDS:3 | 675 | Chr4: 8061320-8061994 | Arabidopsis thaliana |
AT4G13960:CDS:1 | 30 | Chr4: 8062063-8062092 | Arabidopsis thaliana |
AT4G13960:CDS:5.3 | 342 | Chr4: 8060681-8061022 | Arabidopsis thaliana |
AT4G13960:CDS:4.3 | 141 | Chr4: 8061105-8061245 | Arabidopsis thaliana |
AT4G13960:CDS:3.1 | 675 | Chr4: 8061320-8061994 | Arabidopsis thaliana |
AT4G13960:CDS:1.1 | 30 | Chr4: 8062063-8062092 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G13960:exon:1 | 112 | Chr4: 8062941-8063052 | Arabidopsis thaliana |
AT4G13960:exon:11 | 458 | Chr4: 8060565-8061022 | Arabidopsis thaliana |
AT4G13960:exon:7 | 922 | Chr4: 8061320-8062241 | Arabidopsis thaliana |
AT4G13960:exon:3 | 339 | Chr4: 8062714-8063052 | Arabidopsis thaliana |
AT4G13960:exon:4 | 331 | Chr4: 8062714-8063044 | Arabidopsis thaliana |
AT4G13960:exon:10 | 342 | Chr4: 8060681-8061022 | Arabidopsis thaliana |
AT4G13960:exon:9 | 141 | Chr4: 8061105-8061245 | Arabidopsis thaliana |
AT4G13960:exon:8 | 675 | Chr4: 8061320-8061994 | Arabidopsis thaliana |
AT4G13960:exon:6 | 179 | Chr4: 8062063-8062241 | Arabidopsis thaliana |
AT4G13960:exon:5 | 127 | Chr4: 8062714-8062840 | Arabidopsis thaliana |
AT4G13960:exon:2 | 104 | Chr4: 8062941-8063044 | Arabidopsis thaliana |
AT4G06165:exon:1 | 524 | Chr4: 8062698-8063221 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G13960:five_prime_UTR:1 | 112 | Chr4: 8062941-8063052 | Arabidopsis thaliana |
AT4G13960:five_prime_UTR:6 | 10 | Chr4: 8062232-8062241 | Arabidopsis thaliana |
AT4G13960:five_prime_UTR:3 | 339 | Chr4: 8062714-8063052 | Arabidopsis thaliana |
AT4G13960:five_prime_UTR:4 | 331 | Chr4: 8062714-8063044 | Arabidopsis thaliana |
AT4G13960:five_prime_UTR:7 | 149 | Chr4: 8062093-8062241 | Arabidopsis thaliana |
AT4G13960:five_prime_UTR:5 | 127 | Chr4: 8062714-8062840 | Arabidopsis thaliana |
AT4G13960:five_prime_UTR:2 | 104 | Chr4: 8062941-8063044 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G06165 | AT4G06165 | 524 | Chr4: 8062698-8063221 | A. thaliana | None;(source:Araport11) | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G13960.1 | 1760 | Chr4: 8060565-8063052 |
AT4G13960.2 | 1860 | Chr4: 8060565-8063052 |
AT4G13960.3 | 1668 | Chr4: 8060681-8063044 |
AT4G13960.4 | 1568 | Chr4: 8060681-8063044 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G13960:three_prime_UTR:1 | 116 | Chr4: 8060565-8060680 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...