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Gene : SMAP1 A. thaliana

DB identifier  ? AT4G13520 Secondary Identifier  ? locus:2140887
Name  ? small acidic protein 1 Brief Description  small acidic protein 1
TAIR Computational Description  small acidic protein 1;(source:Araport11)
TAIR Curator Summary  Encodes a small acid protein (SMAP1) that mediates responses Arabidopsis root to the synthetic auxin 2,4-Dichlorophenoxyacetic acid. The mRNA is cell-to-cell mobile.
TAIR Short Description  small acidic protein 1
TAIR Aliases  SMAP1

3 Gene Rifs

1 Organism

8 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1439  
Location: Chr4:7864271-7865709

Gene models - SMAP1 AT4G13520

? Gene models

Transcripts: 2  Exons: 3  Introns: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

5 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SMAP1_ARATH function Mediates responses to the synthetic auxin 2,4-dichlorophenoxyacetic acid (2,4-D). Not involved in the response to indole-3-acetic acid (IAA). Interacts with RUB modification-related components and may regulate the cullin-ring ubiquitin E3 ligase complex (CRL) activity.
SMAP1_ARATH tissue specificity Expressed in roots, flowers, siliques, stems, leaves and seeds. In flowers, detected in petals, anthers and pistils.

1 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
No terms in this category.
biological process
response to auxin  ? ECO  
epigenetic regulation of gene expression  ? ECO  
auxin-activated signaling pathway  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets