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Gene : AT4G13210 A. thaliana

DB identifier  ? AT4G13210 Secondary Identifier  ? locus:2119290
Brief Description  Pectin lyase-like superfamily protein
TAIR Computational Description  Pectin lyase-like superfamily protein;(source:Araport11)
TAIR Curator Summary  Pectate lyase
TAIR Short Description  Pectin lyase-like superfamily protein
TAIR Aliases  ATPLL23

0 Gene Rifs

1 Organism

8 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3429  
Location: Chr4:7669948-7673376

Gene models - AT4G13210 AT4G13210

? Gene models

Transcripts: 2  Exons: 14  Introns: 12 

Overlapping Features

? Genome features that overlap coordinates of this Gene

12 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PLY14_ARATH F4JSA1_ARATH pathway Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-gluconate from pectin: step 2/5.
PLY14_ARATH F4JSA1_ARATH similarity Belongs to the polysaccharide lyase 1 family.

2 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
pectate lyase activity  ? ECO  
metal ion binding  ? ECO  
biological process
pectin catabolic process  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets