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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G12640:CDS:1 | 3 | Chr4: 7462697-7462699 | Arabidopsis thaliana |
AT4G12640:CDS:2 | 282 | Chr4: 7462788-7463069 | Arabidopsis thaliana |
AT4G12640:CDS:3 | 1208 | Chr4: 7465237-7466444 | Arabidopsis thaliana |
AT4G12640:CDS:5 | 979 | Chr4: 7466652-7467630 | Arabidopsis thaliana |
AT4G12640:CDS:4 | 1109 | Chr4: 7465336-7466444 | Arabidopsis thaliana |
AT4G12640:CDS:5.1 | 979 | Chr4: 7466652-7467630 | Arabidopsis thaliana |
AT4G12640:CDS:4.1 | 1109 | Chr4: 7465336-7466444 | Arabidopsis thaliana |
AT4G12640:CDS:5.2 | 979 | Chr4: 7466652-7467630 | Arabidopsis thaliana |
AT4G12640:CDS:4.2 | 1109 | Chr4: 7465336-7466444 | Arabidopsis thaliana |
AT4G12640:CDS:5.3 | 979 | Chr4: 7466652-7467630 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G12640:exon:1 | 168 | Chr4: 7462532-7462699 | Arabidopsis thaliana |
AT4G12640:exon:3 | 282 | Chr4: 7462788-7463069 | Arabidopsis thaliana |
AT4G12640:exon:8 | 1208 | Chr4: 7465237-7466444 | Arabidopsis thaliana |
AT4G12640:exon:2 | 147 | Chr4: 7462553-7462699 | Arabidopsis thaliana |
AT4G12640:exon:4 | 3657 | Chr4: 7462788-7466444 | Arabidopsis thaliana |
AT4G12640:exon:10 | 1219 | Chr4: 7466652-7467870 | Arabidopsis thaliana |
AT4G12640:exon:5 | 194 | Chr4: 7463107-7463300 | Arabidopsis thaliana |
AT4G12640:exon:6 | 3020 | Chr4: 7463425-7466444 | Arabidopsis thaliana |
AT4G12640:exon:7 | 2647 | Chr4: 7463798-7466444 | Arabidopsis thaliana |
AT4G12640:exon:9 | 1211 | Chr4: 7466652-7467862 | Arabidopsis thaliana |
AT4G12650:exon:2 | 2330 | Chr4: 7467845-7470174 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G12640:five_prime_UTR:1 | 165 | Chr4: 7462532-7462696 | Arabidopsis thaliana |
AT4G12640:five_prime_UTR:2 | 147 | Chr4: 7462553-7462699 | Arabidopsis thaliana |
AT4G12640:five_prime_UTR:3 | 2548 | Chr4: 7462788-7465335 | Arabidopsis thaliana |
AT4G12640:five_prime_UTR:4 | 194 | Chr4: 7463107-7463300 | Arabidopsis thaliana |
AT4G12640:five_prime_UTR:5 | 1911 | Chr4: 7463425-7465335 | Arabidopsis thaliana |
AT4G12640:five_prime_UTR:6 | 1538 | Chr4: 7463798-7465335 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G12650 | locus:2135620 | AT4G12650 | 2893 | Chr4: 7467845-7470737 | A. thaliana | Endomembrane protein 70 protein family;(source:Araport11) | NULL | Endomembrane protein 70 protein family | TMN12 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G12640.1 | 2869 | Chr4: 7462532-7467862 |
AT4G12640.2 | 5023 | Chr4: 7462553-7467870 |
AT4G12640.3 | 4425 | Chr4: 7463107-7467862 |
AT4G12640.4 | 3858 | Chr4: 7463798-7467862 |
AT4G12650.1 | 2583 | Chr4: 7467845-7470737 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G12640:three_prime_UTR:2 | 240 | Chr4: 7467631-7467870 | Arabidopsis thaliana |
AT4G12640:three_prime_UTR:1 | 232 | Chr4: 7467631-7467862 | Arabidopsis thaliana |
AT4G12650:three_prime_UTR:1 | 362 | Chr4: 7467845-7468206 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
RNA binding | ECO |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...