External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 24, Exons: 16, Five Prime UTRs: 6, mRNAs: 5, Three Prime UTRs: 3, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G12540:CDS:10 | 260 | Chr4: 7429876-7430135 | Arabidopsis thaliana |
AT4G12540:CDS:9 | 832 | Chr4: 7430228-7431059 | Arabidopsis thaliana |
AT4G12540:CDS:6 | 111 | Chr4: 7431158-7431268 | Arabidopsis thaliana |
AT4G12540:CDS:4 | 80 | Chr4: 7431365-7431444 | Arabidopsis thaliana |
AT4G12540:CDS:1 | 31 | Chr4: 7431572-7431602 | Arabidopsis thaliana |
AT4G12540:CDS:10.1 | 260 | Chr4: 7429876-7430135 | Arabidopsis thaliana |
AT4G12540:CDS:9.1 | 832 | Chr4: 7430228-7431059 | Arabidopsis thaliana |
AT4G12540:CDS:6.1 | 111 | Chr4: 7431158-7431268 | Arabidopsis thaliana |
AT4G12540:CDS:2 | 101 | Chr4: 7431365-7431465 | Arabidopsis thaliana |
AT4G12540:CDS:1.1 | 31 | Chr4: 7431572-7431602 | Arabidopsis thaliana |
AT4G12540:CDS:10.2 | 260 | Chr4: 7429876-7430135 | Arabidopsis thaliana |
AT4G12540:CDS:9.2 | 832 | Chr4: 7430228-7431059 | Arabidopsis thaliana |
AT4G12540:CDS:5 | 133 | Chr4: 7431158-7431290 | Arabidopsis thaliana |
AT4G12540:CDS:3 | 86 | Chr4: 7431365-7431450 | Arabidopsis thaliana |
AT4G12540:CDS:10.3 | 260 | Chr4: 7429876-7430135 | Arabidopsis thaliana |
AT4G12540:CDS:9.3 | 832 | Chr4: 7430228-7431059 | Arabidopsis thaliana |
AT4G12540:CDS:6.2 | 111 | Chr4: 7431158-7431268 | Arabidopsis thaliana |
AT4G12540:CDS:2.1 | 101 | Chr4: 7431365-7431465 | Arabidopsis thaliana |
AT4G12540:CDS:1.2 | 31 | Chr4: 7431572-7431602 | Arabidopsis thaliana |
AT4G12540:CDS:10.4 | 260 | Chr4: 7429876-7430135 | Arabidopsis thaliana |
AT4G12540:CDS:8 | 860 | Chr4: 7430228-7431087 | Arabidopsis thaliana |
AT4G12540:CDS:7 | 134 | Chr4: 7431135-7431268 | Arabidopsis thaliana |
AT4G12540:CDS:2.2 | 101 | Chr4: 7431365-7431465 | Arabidopsis thaliana |
AT4G12540:CDS:1.3 | 31 | Chr4: 7431572-7431602 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G12540:exon:7 | 80 | Chr4: 7431365-7431444 | Arabidopsis thaliana |
AT4G12540:exon:16 | 431 | Chr4: 7429705-7430135 | Arabidopsis thaliana |
AT4G12540:exon:1 | 202 | Chr4: 7431826-7432027 | Arabidopsis thaliana |
AT4G12540:exon:15 | 423 | Chr4: 7429713-7430135 | Arabidopsis thaliana |
AT4G12540:exon:8 | 133 | Chr4: 7431158-7431290 | Arabidopsis thaliana |
AT4G12540:exon:2 | 187 | Chr4: 7431826-7432012 | Arabidopsis thaliana |
AT4G12540:exon:14 | 383 | Chr4: 7429753-7430135 | Arabidopsis thaliana |
AT4G12540:exon:12 | 832 | Chr4: 7430228-7431059 | Arabidopsis thaliana |
AT4G12540:exon:9 | 111 | Chr4: 7431158-7431268 | Arabidopsis thaliana |
AT4G12540:exon:5 | 31 | Chr4: 7431572-7431602 | Arabidopsis thaliana |
AT4G12540:exon:13 | 260 | Chr4: 7429876-7430135 | Arabidopsis thaliana |
AT4G12540:exon:11 | 860 | Chr4: 7430228-7431087 | Arabidopsis thaliana |
AT4G12540:exon:10 | 134 | Chr4: 7431135-7431268 | Arabidopsis thaliana |
AT4G12540:exon:6 | 101 | Chr4: 7431365-7431465 | Arabidopsis thaliana |
AT4G12540:exon:4 | 74 | Chr4: 7431572-7431645 | Arabidopsis thaliana |
AT4G12540:exon:3 | 179 | Chr4: 7431826-7432004 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G12540:five_prime_UTR:1 | 202 | Chr4: 7431826-7432027 | Arabidopsis thaliana |
AT4G12540:five_prime_UTR:6 | 15 | Chr4: 7431451-7431465 | Arabidopsis thaliana |
AT4G12540:five_prime_UTR:5 | 74 | Chr4: 7431572-7431645 | Arabidopsis thaliana |
AT4G12540:five_prime_UTR:2 | 187 | Chr4: 7431826-7432012 | Arabidopsis thaliana |
AT4G12540:five_prime_UTR:4 | 43 | Chr4: 7431603-7431645 | Arabidopsis thaliana |
AT4G12540:five_prime_UTR:3 | 179 | Chr4: 7431826-7432004 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G12540.3 | 1730 | Chr4: 7429705-7432027 |
AT4G12540.2 | 1751 | Chr4: 7429705-7432027 |
AT4G12540.4 | 1750 | Chr4: 7429713-7432012 |
AT4G12540.5 | 1458 | Chr4: 7429753-7431602 |
AT4G12540.1 | 1608 | Chr4: 7429876-7432004 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G12540:three_prime_UTR:3 | 171 | Chr4: 7429705-7429875 | Arabidopsis thaliana |
AT4G12540:three_prime_UTR:2 | 163 | Chr4: 7429713-7429875 | Arabidopsis thaliana |
AT4G12540:three_prime_UTR:1 | 123 | Chr4: 7429753-7429875 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE32360 | 308 | Chr4: 7432013-7432320 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE32360:transposon_fragment:1 | 308 | Chr4: 7432013-7432320 | Arabidopsis thaliana |