External Links
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- Plant Proteome Database
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 33, Exons: 15, Gene: 1, mRNAs: 4, Three Prime UTRs: 5, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G10890:CDS:1 | 211 | Chr4: 6688833-6689043 | Arabidopsis thaliana |
AT4G10890:CDS:2 | 273 | Chr4: 6689215-6689487 | Arabidopsis thaliana |
AT4G10890:CDS:3 | 151 | Chr4: 6689992-6690142 | Arabidopsis thaliana |
AT4G10890:CDS:4 | 190 | Chr4: 6690303-6690492 | Arabidopsis thaliana |
AT4G10890:CDS:5 | 235 | Chr4: 6691006-6691240 | Arabidopsis thaliana |
AT4G10890:CDS:6 | 72 | Chr4: 6691336-6691407 | Arabidopsis thaliana |
AT4G10890:CDS:7 | 60 | Chr4: 6691528-6691587 | Arabidopsis thaliana |
AT4G10890:CDS:8 | 69 | Chr4: 6692079-6692147 | Arabidopsis thaliana |
AT4G10890:CDS:9 | 78 | Chr4: 6692341-6692418 | Arabidopsis thaliana |
AT4G10890:CDS:10 | 147 | Chr4: 6692520-6692666 | Arabidopsis thaliana |
AT4G10890:CDS:11 | 98 | Chr4: 6692840-6692937 | Arabidopsis thaliana |
AT4G10890:CDS:1.1 | 211 | Chr4: 6688833-6689043 | Arabidopsis thaliana |
AT4G10890:CDS:2.1 | 273 | Chr4: 6689215-6689487 | Arabidopsis thaliana |
AT4G10890:CDS:3.1 | 151 | Chr4: 6689992-6690142 | Arabidopsis thaliana |
AT4G10890:CDS:4.1 | 190 | Chr4: 6690303-6690492 | Arabidopsis thaliana |
AT4G10890:CDS:5.1 | 235 | Chr4: 6691006-6691240 | Arabidopsis thaliana |
AT4G10890:CDS:6.1 | 72 | Chr4: 6691336-6691407 | Arabidopsis thaliana |
AT4G10890:CDS:7.1 | 60 | Chr4: 6691528-6691587 | Arabidopsis thaliana |
AT4G10890:CDS:8.1 | 69 | Chr4: 6692079-6692147 | Arabidopsis thaliana |
AT4G10890:CDS:9.1 | 78 | Chr4: 6692341-6692418 | Arabidopsis thaliana |
AT4G10890:CDS:10.1 | 147 | Chr4: 6692520-6692666 | Arabidopsis thaliana |
AT4G10890:CDS:11.1 | 98 | Chr4: 6692840-6692937 | Arabidopsis thaliana |
AT4G10890:CDS:1.2 | 211 | Chr4: 6688833-6689043 | Arabidopsis thaliana |
AT4G10890:CDS:2.2 | 273 | Chr4: 6689215-6689487 | Arabidopsis thaliana |
AT4G10890:CDS:3.2 | 151 | Chr4: 6689992-6690142 | Arabidopsis thaliana |
AT4G10890:CDS:4.2 | 190 | Chr4: 6690303-6690492 | Arabidopsis thaliana |
AT4G10890:CDS:5.2 | 235 | Chr4: 6691006-6691240 | Arabidopsis thaliana |
AT4G10890:CDS:6.2 | 72 | Chr4: 6691336-6691407 | Arabidopsis thaliana |
AT4G10890:CDS:7.2 | 60 | Chr4: 6691528-6691587 | Arabidopsis thaliana |
AT4G10890:CDS:8.2 | 69 | Chr4: 6692079-6692147 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G10890:exon:13 | 525 | Chr4: 6693237-6693761 | Arabidopsis thaliana |
AT4G10890:exon:12 | 1064 | Chr4: 6692840-6693903 | Arabidopsis thaliana |
AT4G10890:exon:1 | 211 | Chr4: 6688833-6689043 | Arabidopsis thaliana |
AT4G10890:exon:2 | 273 | Chr4: 6689215-6689487 | Arabidopsis thaliana |
AT4G10890:exon:3 | 151 | Chr4: 6689992-6690142 | Arabidopsis thaliana |
AT4G10890:exon:4 | 190 | Chr4: 6690303-6690492 | Arabidopsis thaliana |
AT4G10890:exon:5 | 235 | Chr4: 6691006-6691240 | Arabidopsis thaliana |
AT4G10890:exon:6 | 72 | Chr4: 6691336-6691407 | Arabidopsis thaliana |
AT4G10890:exon:7 | 60 | Chr4: 6691528-6691587 | Arabidopsis thaliana |
AT4G10890:exon:8 | 69 | Chr4: 6692079-6692147 | Arabidopsis thaliana |
AT4G10890:exon:9 | 78 | Chr4: 6692341-6692418 | Arabidopsis thaliana |
AT4G10890:exon:10 | 147 | Chr4: 6692520-6692666 | Arabidopsis thaliana |
AT4G10890:exon:11 | 126 | Chr4: 6692840-6692965 | Arabidopsis thaliana |
AT4G10890:exon:14 | 463 | Chr4: 6693441-6693903 | Arabidopsis thaliana |
AT4G10895:exon:2 | 815 | Chr4: 6693364-6694178 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G10895 | locus:1006230321 | AT4G10895 | 1355 | Chr4: 6693364-6694718 | A. thaliana | Plant self-incompatibility protein S1 family;(source:Araport11) | NULL | Plant self-incompatibility protein S1 family |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G10890.1 | 2137 | Chr4: 6688833-6693761 |
AT4G10890.2 | 2550 | Chr4: 6688833-6693903 |
AT4G10890.3 | 2075 | Chr4: 6688833-6693903 |
AT4G10895.1 | 1069 | Chr4: 6693364-6694718 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G10890:three_prime_UTR:3 | 525 | Chr4: 6693237-6693761 | Arabidopsis thaliana |
AT4G10890:three_prime_UTR:2 | 966 | Chr4: 6692938-6693903 | Arabidopsis thaliana |
AT4G10890:three_prime_UTR:1 | 28 | Chr4: 6692938-6692965 | Arabidopsis thaliana |
AT4G10890:three_prime_UTR:4 | 463 | Chr4: 6693441-6693903 | Arabidopsis thaliana |
AT4G10895:three_prime_UTR:1 | 635 | Chr4: 6693364-6693998 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE28690 | 885 | Chr4: 6688783-6689667 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE28690:transposon_fragment:1 | 885 | Chr4: 6688783-6689667 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
endonuclease activity | ECO |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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