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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
Antisense lncRNA: 1, CDSs: 41, Exons: 26, Five Prime UTRs: 2, Genes: 2, mRNAs: 4, Three Prime UTRs: 2
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G10730:CDS:22 | 45 | Chr4: 6609793-6609837 | Arabidopsis thaliana |
AT4G10730:CDS:21 | 52 | Chr4: 6609965-6610016 | Arabidopsis thaliana |
AT4G10730:CDS:20 | 68 | Chr4: 6610109-6610176 | Arabidopsis thaliana |
AT4G10730:CDS:19 | 56 | Chr4: 6610256-6610311 | Arabidopsis thaliana |
AT4G10730:CDS:18 | 55 | Chr4: 6610397-6610451 | Arabidopsis thaliana |
AT4G10730:CDS:17 | 93 | Chr4: 6610558-6610650 | Arabidopsis thaliana |
AT4G10730:CDS:16 | 57 | Chr4: 6610724-6610780 | Arabidopsis thaliana |
AT4G10730:CDS:15 | 95 | Chr4: 6610973-6611067 | Arabidopsis thaliana |
AT4G10730:CDS:14 | 122 | Chr4: 6611159-6611280 | Arabidopsis thaliana |
AT4G10730:CDS:13 | 278 | Chr4: 6611400-6611677 | Arabidopsis thaliana |
AT4G10730:CDS:12 | 72 | Chr4: 6611775-6611846 | Arabidopsis thaliana |
AT4G10730:CDS:11 | 69 | Chr4: 6611945-6612013 | Arabidopsis thaliana |
AT4G10730:CDS:10 | 66 | Chr4: 6612095-6612160 | Arabidopsis thaliana |
AT4G10730:CDS:9 | 171 | Chr4: 6612240-6612410 | Arabidopsis thaliana |
AT4G10730:CDS:8 | 69 | Chr4: 6612504-6612572 | Arabidopsis thaliana |
AT4G10730:CDS:7 | 82 | Chr4: 6612635-6612716 | Arabidopsis thaliana |
AT4G10730:CDS:6 | 45 | Chr4: 6613016-6613060 | Arabidopsis thaliana |
AT4G10730:CDS:5 | 125 | Chr4: 6613156-6613280 | Arabidopsis thaliana |
AT4G10730:CDS:4 | 255 | Chr4: 6613362-6613616 | Arabidopsis thaliana |
AT4G10730:CDS:2 | 232 | Chr4: 6614434-6614665 | Arabidopsis thaliana |
AT4G10730:CDS:1 | 29 | Chr4: 6614758-6614786 | Arabidopsis thaliana |
AT4G10730:CDS:22.1 | 45 | Chr4: 6609793-6609837 | Arabidopsis thaliana |
AT4G10730:CDS:21.1 | 52 | Chr4: 6609965-6610016 | Arabidopsis thaliana |
AT4G10730:CDS:20.1 | 68 | Chr4: 6610109-6610176 | Arabidopsis thaliana |
AT4G10730:CDS:19.1 | 56 | Chr4: 6610256-6610311 | Arabidopsis thaliana |
AT4G10730:CDS:18.1 | 55 | Chr4: 6610397-6610451 | Arabidopsis thaliana |
AT4G10730:CDS:17.1 | 93 | Chr4: 6610558-6610650 | Arabidopsis thaliana |
AT4G10730:CDS:16.1 | 57 | Chr4: 6610724-6610780 | Arabidopsis thaliana |
AT4G10730:CDS:15.1 | 95 | Chr4: 6610973-6611067 | Arabidopsis thaliana |
AT4G10730:CDS:14.1 | 122 | Chr4: 6611159-6611280 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G10720:exon:5 | 458 | Chr4: 6609102-6609559 | Arabidopsis thaliana |
AT4G10720:exon:4 | 1226 | Chr4: 6608334-6609559 | Arabidopsis thaliana |
AT4G10730:exon:23 | 420 | Chr4: 6609418-6609837 | Arabidopsis thaliana |
AT4G10730:exon:3 | 232 | Chr4: 6614434-6614665 | Arabidopsis thaliana |
AT4G10730:exon:1 | 130 | Chr4: 6614758-6614887 | Arabidopsis thaliana |
AT4G10730:exon:22 | 45 | Chr4: 6609793-6609837 | Arabidopsis thaliana |
AT4G10730:exon:21 | 52 | Chr4: 6609965-6610016 | Arabidopsis thaliana |
AT4G10730:exon:20 | 68 | Chr4: 6610109-6610176 | Arabidopsis thaliana |
AT4G10730:exon:19 | 56 | Chr4: 6610256-6610311 | Arabidopsis thaliana |
AT4G10730:exon:18 | 55 | Chr4: 6610397-6610451 | Arabidopsis thaliana |
AT4G10730:exon:17 | 93 | Chr4: 6610558-6610650 | Arabidopsis thaliana |
AT4G10730:exon:16 | 57 | Chr4: 6610724-6610780 | Arabidopsis thaliana |
AT4G10730:exon:15 | 95 | Chr4: 6610973-6611067 | Arabidopsis thaliana |
AT4G10730:exon:14 | 122 | Chr4: 6611159-6611280 | Arabidopsis thaliana |
AT4G10730:exon:13 | 278 | Chr4: 6611400-6611677 | Arabidopsis thaliana |
AT4G10730:exon:12 | 72 | Chr4: 6611775-6611846 | Arabidopsis thaliana |
AT4G10730:exon:11 | 69 | Chr4: 6611945-6612013 | Arabidopsis thaliana |
AT4G10730:exon:10 | 66 | Chr4: 6612095-6612160 | Arabidopsis thaliana |
AT4G10730:exon:9 | 171 | Chr4: 6612240-6612410 | Arabidopsis thaliana |
AT4G10730:exon:8 | 69 | Chr4: 6612504-6612572 | Arabidopsis thaliana |
AT4G10730:exon:7 | 82 | Chr4: 6612635-6612716 | Arabidopsis thaliana |
AT4G10730:exon:6 | 45 | Chr4: 6613016-6613060 | Arabidopsis thaliana |
AT4G10730:exon:5 | 125 | Chr4: 6613156-6613280 | Arabidopsis thaliana |
AT4G10730:exon:4 | 255 | Chr4: 6613362-6613616 | Arabidopsis thaliana |
AT4G10730:exon:2 | 454 | Chr4: 6614434-6614887 | Arabidopsis thaliana |
AT4G05810:exon:1 | 234 | Chr4: 6614223-6614456 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G10730:five_prime_UTR:1 | 101 | Chr4: 6614787-6614887 | Arabidopsis thaliana |
AT4G10730:five_prime_UTR:2 | 253 | Chr4: 6614635-6614887 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G10720 | locus:2132711 | AT4G10720 | 1763 | Chr4: 6607797-6609559 | A. thaliana | Ankyrin repeat family protein;(source:Araport11) | NULL | Ankyrin repeat family protein | ||
AT4G05810 | AT4G05810 | 234 | Chr4: 6614223-6614456 | A. thaliana | Natural antisense transcript overlaps with AT4G10730;(source:Araport11) | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G10720.2 | 1522 | Chr4: 6607797-6609559 |
AT4G10720.1 | 1567 | Chr4: 6607851-6609559 |
AT4G10730.1 | 2612 | Chr4: 6609418-6614887 |
AT4G10730.2 | 2329 | Chr4: 6609793-6614887 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G10720:three_prime_UTR:1 | 201 | Chr4: 6609359-6609559 | Arabidopsis thaliana |
AT4G10730:three_prime_UTR:1 | 375 | Chr4: 6609418-6609792 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A1P8B6A6_ARATH F4JMF4_ARATH | similarity | Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. STE20 subfamily. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
ATP binding | ECO |
protein kinase activity | ECO |
protein serine/threonine kinase activator activity | ECO |
biological process | |
protein phosphorylation | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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