External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
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- Plaza
- pep2pro
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- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G10550:CDS:14 | 572 | Chr4: 6516613-6517184 | Arabidopsis thaliana |
AT4G10550:CDS:13 | 190 | Chr4: 6517266-6517455 | Arabidopsis thaliana |
AT4G10550:CDS:12 | 115 | Chr4: 6517537-6517651 | Arabidopsis thaliana |
AT4G10550:CDS:11 | 249 | Chr4: 6517729-6517977 | Arabidopsis thaliana |
AT4G10550:CDS:10 | 89 | Chr4: 6518072-6518160 | Arabidopsis thaliana |
AT4G10550:CDS:9 | 677 | Chr4: 6518253-6518929 | Arabidopsis thaliana |
AT4G10550:CDS:8 | 156 | Chr4: 6519050-6519205 | Arabidopsis thaliana |
AT4G10550:CDS:7 | 98 | Chr4: 6519308-6519405 | Arabidopsis thaliana |
AT4G10550:CDS:6 | 23 | Chr4: 6519491-6519513 | Arabidopsis thaliana |
AT4G10550:CDS:14.1 | 572 | Chr4: 6516613-6517184 | Arabidopsis thaliana |
AT4G10550:CDS:13.1 | 190 | Chr4: 6517266-6517455 | Arabidopsis thaliana |
AT4G10550:CDS:12.1 | 115 | Chr4: 6517537-6517651 | Arabidopsis thaliana |
AT4G10550:CDS:11.1 | 249 | Chr4: 6517729-6517977 | Arabidopsis thaliana |
AT4G10550:CDS:10.1 | 89 | Chr4: 6518072-6518160 | Arabidopsis thaliana |
AT4G10550:CDS:9.1 | 677 | Chr4: 6518253-6518929 | Arabidopsis thaliana |
AT4G10550:CDS:8.1 | 156 | Chr4: 6519050-6519205 | Arabidopsis thaliana |
AT4G10550:CDS:7.1 | 98 | Chr4: 6519308-6519405 | Arabidopsis thaliana |
AT4G10550:CDS:6.1 | 23 | Chr4: 6519491-6519513 | Arabidopsis thaliana |
AT4G10550:CDS:14.2 | 572 | Chr4: 6516613-6517184 | Arabidopsis thaliana |
AT4G10550:CDS:13.2 | 190 | Chr4: 6517266-6517455 | Arabidopsis thaliana |
AT4G10550:CDS:12.2 | 115 | Chr4: 6517537-6517651 | Arabidopsis thaliana |
AT4G10550:CDS:11.2 | 249 | Chr4: 6517729-6517977 | Arabidopsis thaliana |
AT4G10550:CDS:10.2 | 89 | Chr4: 6518072-6518160 | Arabidopsis thaliana |
AT4G10550:CDS:9.2 | 677 | Chr4: 6518253-6518929 | Arabidopsis thaliana |
AT4G10550:CDS:8.2 | 156 | Chr4: 6519050-6519205 | Arabidopsis thaliana |
AT4G10550:CDS:7.2 | 98 | Chr4: 6519308-6519405 | Arabidopsis thaliana |
AT4G10550:CDS:5 | 92 | Chr4: 6519491-6519582 | Arabidopsis thaliana |
AT4G10550:CDS:4 | 36 | Chr4: 6519669-6519704 | Arabidopsis thaliana |
AT4G10550:CDS:2 | 53 | Chr4: 6520086-6520138 | Arabidopsis thaliana |
AT4G10550:CDS:1 | 58 | Chr4: 6520215-6520272 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G10550:exon:18 | 761 | Chr4: 6516424-6517184 | Arabidopsis thaliana |
AT4G10550:exon:2 | 237 | Chr4: 6520086-6520322 | Arabidopsis thaliana |
AT4G10550:exon:17 | 709 | Chr4: 6516476-6517184 | Arabidopsis thaliana |
AT4G10550:exon:4 | 283 | Chr4: 6520035-6520317 | Arabidopsis thaliana |
AT4G10550:exon:16 | 693 | Chr4: 6516492-6517184 | Arabidopsis thaliana |
AT4G10550:exon:6 | 36 | Chr4: 6519669-6519704 | Arabidopsis thaliana |
AT4G10550:exon:3 | 53 | Chr4: 6520086-6520138 | Arabidopsis thaliana |
AT4G10550:exon:1 | 103 | Chr4: 6520215-6520317 | Arabidopsis thaliana |
AT4G10550:exon:15 | 689 | Chr4: 6516496-6517184 | Arabidopsis thaliana |
AT4G10550:exon:14 | 190 | Chr4: 6517266-6517455 | Arabidopsis thaliana |
AT4G10550:exon:13 | 115 | Chr4: 6517537-6517651 | Arabidopsis thaliana |
AT4G10550:exon:12 | 249 | Chr4: 6517729-6517977 | Arabidopsis thaliana |
AT4G10550:exon:11 | 89 | Chr4: 6518072-6518160 | Arabidopsis thaliana |
AT4G10550:exon:10 | 677 | Chr4: 6518253-6518929 | Arabidopsis thaliana |
AT4G10550:exon:9 | 156 | Chr4: 6519050-6519205 | Arabidopsis thaliana |
AT4G10550:exon:8 | 98 | Chr4: 6519308-6519405 | Arabidopsis thaliana |
AT4G10550:exon:7 | 92 | Chr4: 6519491-6519582 | Arabidopsis thaliana |
AT4G10550:exon:5 | 191 | Chr4: 6519669-6519859 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G10550:five_prime_UTR:2 | 237 | Chr4: 6520086-6520322 | Arabidopsis thaliana |
AT4G10550:five_prime_UTR:6 | 69 | Chr4: 6519514-6519582 | Arabidopsis thaliana |
AT4G10550:five_prime_UTR:5 | 36 | Chr4: 6519669-6519704 | Arabidopsis thaliana |
AT4G10550:five_prime_UTR:3 | 283 | Chr4: 6520035-6520317 | Arabidopsis thaliana |
AT4G10550:five_prime_UTR:1 | 45 | Chr4: 6520273-6520317 | Arabidopsis thaliana |
AT4G10550:five_prime_UTR:4 | 92 | Chr4: 6519768-6519859 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G10550.2 | 2700 | Chr4: 6516424-6520322 |
AT4G10550.4 | 2694 | Chr4: 6516476-6520317 |
AT4G10550.3 | 2551 | Chr4: 6516492-6520317 |
AT4G10550.1 | 2546 | Chr4: 6516496-6519859 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G10550:three_prime_UTR:4 | 189 | Chr4: 6516424-6516612 | Arabidopsis thaliana |
AT4G10550:three_prime_UTR:3 | 137 | Chr4: 6516476-6516612 | Arabidopsis thaliana |
AT4G10550:three_prime_UTR:2 | 121 | Chr4: 6516492-6516612 | Arabidopsis thaliana |
AT4G10550:three_prime_UTR:1 | 117 | Chr4: 6516496-6516612 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
SBT36_ARATH-3 SBT36_ARATH SBT36_ARATH-2 | similarity | Belongs to the peptidase S8 family. |
Function
Gene Ontology
cellular component | |
---|---|
cytosol | ECO |
extracellular region | ECO |
molecular function | |
serine-type endopeptidase activity | ECO |
biological process | |
proteolysis | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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