External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G10120:CDS:1 | 258 | Chr4: 6315033-6315290 | Arabidopsis thaliana |
AT4G10120:CDS:2 | 90 | Chr4: 6315418-6315507 | Arabidopsis thaliana |
AT4G10120:CDS:3 | 254 | Chr4: 6315637-6315890 | Arabidopsis thaliana |
AT4G10120:CDS:5 | 64 | Chr4: 6315990-6316053 | Arabidopsis thaliana |
AT4G10120:CDS:7 | 200 | Chr4: 6316176-6316375 | Arabidopsis thaliana |
AT4G10120:CDS:8 | 481 | Chr4: 6316472-6316952 | Arabidopsis thaliana |
AT4G10120:CDS:9 | 132 | Chr4: 6317122-6317253 | Arabidopsis thaliana |
AT4G10120:CDS:10 | 132 | Chr4: 6317369-6317500 | Arabidopsis thaliana |
AT4G10120:CDS:11 | 177 | Chr4: 6317616-6317792 | Arabidopsis thaliana |
AT4G10120:CDS:12 | 54 | Chr4: 6318053-6318106 | Arabidopsis thaliana |
AT4G10120:CDS:13 | 63 | Chr4: 6318197-6318259 | Arabidopsis thaliana |
AT4G10120:CDS:14 | 843 | Chr4: 6318358-6319200 | Arabidopsis thaliana |
AT4G10120:CDS:15 | 128 | Chr4: 6319281-6319408 | Arabidopsis thaliana |
AT4G10120:CDS:16 | 277 | Chr4: 6319509-6319785 | Arabidopsis thaliana |
AT4G10120:CDS:1.1 | 258 | Chr4: 6315033-6315290 | Arabidopsis thaliana |
AT4G10120:CDS:2.1 | 90 | Chr4: 6315418-6315507 | Arabidopsis thaliana |
AT4G10120:CDS:3.1 | 254 | Chr4: 6315637-6315890 | Arabidopsis thaliana |
AT4G10120:CDS:5.1 | 64 | Chr4: 6315990-6316053 | Arabidopsis thaliana |
AT4G10120:CDS:7.1 | 200 | Chr4: 6316176-6316375 | Arabidopsis thaliana |
AT4G10120:CDS:8.1 | 481 | Chr4: 6316472-6316952 | Arabidopsis thaliana |
AT4G10120:CDS:9.1 | 132 | Chr4: 6317122-6317253 | Arabidopsis thaliana |
AT4G10120:CDS:10.1 | 132 | Chr4: 6317369-6317500 | Arabidopsis thaliana |
AT4G10120:CDS:11.1 | 177 | Chr4: 6317616-6317792 | Arabidopsis thaliana |
AT4G10120:CDS:12.1 | 54 | Chr4: 6318053-6318106 | Arabidopsis thaliana |
AT4G10120:CDS:13.1 | 63 | Chr4: 6318197-6318259 | Arabidopsis thaliana |
AT4G10120:CDS:14.1 | 843 | Chr4: 6318358-6319200 | Arabidopsis thaliana |
AT4G10120:CDS:15.1 | 128 | Chr4: 6319281-6319408 | Arabidopsis thaliana |
AT4G10120:CDS:16.1 | 277 | Chr4: 6319509-6319785 | Arabidopsis thaliana |
AT4G10120:CDS:4 | 80 | Chr4: 6315811-6315890 | Arabidopsis thaliana |
AT4G10120:CDS:5.2 | 64 | Chr4: 6315990-6316053 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G10120:exon:1 | 1012 | Chr4: 6313914-6314925 | Arabidopsis thaliana |
AT4G10120:exon:6 | 274 | Chr4: 6315017-6315290 | Arabidopsis thaliana |
AT4G10120:exon:23 | 578 | Chr4: 6319509-6320086 | Arabidopsis thaliana |
AT4G10120:exon:2 | 1377 | Chr4: 6313914-6315290 | Arabidopsis thaliana |
AT4G10120:exon:24 | 586 | Chr4: 6319509-6320094 | Arabidopsis thaliana |
AT4G10120:exon:3 | 536 | Chr4: 6314755-6315290 | Arabidopsis thaliana |
AT4G10120:exon:8 | 473 | Chr4: 6315418-6315890 | Arabidopsis thaliana |
AT4G10120:exon:4 | 152 | Chr4: 6314774-6314925 | Arabidopsis thaliana |
AT4G10120:exon:5 | 284 | Chr4: 6315007-6315290 | Arabidopsis thaliana |
AT4G10120:exon:7 | 90 | Chr4: 6315418-6315507 | Arabidopsis thaliana |
AT4G10120:exon:9 | 254 | Chr4: 6315637-6315890 | Arabidopsis thaliana |
AT4G10120:exon:11 | 64 | Chr4: 6315990-6316053 | Arabidopsis thaliana |
AT4G10120:exon:21 | 435 | Chr4: 6319509-6319943 | Arabidopsis thaliana |
AT4G10120:exon:10 | 103 | Chr4: 6315951-6316053 | Arabidopsis thaliana |
AT4G10120:exon:12 | 200 | Chr4: 6316176-6316375 | Arabidopsis thaliana |
AT4G10120:exon:13 | 481 | Chr4: 6316472-6316952 | Arabidopsis thaliana |
AT4G10120:exon:14 | 132 | Chr4: 6317122-6317253 | Arabidopsis thaliana |
AT4G10120:exon:15 | 132 | Chr4: 6317369-6317500 | Arabidopsis thaliana |
AT4G10120:exon:16 | 177 | Chr4: 6317616-6317792 | Arabidopsis thaliana |
AT4G10120:exon:17 | 54 | Chr4: 6318053-6318106 | Arabidopsis thaliana |
AT4G10120:exon:18 | 63 | Chr4: 6318197-6318259 | Arabidopsis thaliana |
AT4G10120:exon:19 | 843 | Chr4: 6318358-6319200 | Arabidopsis thaliana |
AT4G10120:exon:20 | 128 | Chr4: 6319281-6319408 | Arabidopsis thaliana |
AT4G10120:exon:22 | 477 | Chr4: 6319509-6319985 | Arabidopsis thaliana |
AT4G10130:exon:7 | 166 | Chr4: 6319928-6320093 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G10120:five_prime_UTR:1 | 1012 | Chr4: 6313914-6314925 | Arabidopsis thaliana |
AT4G10120:five_prime_UTR:6 | 16 | Chr4: 6315017-6315032 | Arabidopsis thaliana |
AT4G10120:five_prime_UTR:2 | 1119 | Chr4: 6313914-6315032 | Arabidopsis thaliana |
AT4G10120:five_prime_UTR:3 | 536 | Chr4: 6314755-6315290 | Arabidopsis thaliana |
AT4G10120:five_prime_UTR:7 | 393 | Chr4: 6315418-6315810 | Arabidopsis thaliana |
AT4G10120:five_prime_UTR:4 | 152 | Chr4: 6314774-6314925 | Arabidopsis thaliana |
AT4G10120:five_prime_UTR:5 | 26 | Chr4: 6315007-6315032 | Arabidopsis thaliana |
AT4G10120:five_prime_UTR:8 | 40 | Chr4: 6315951-6315990 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G10130 | locus:2124685 | AT4G10130 | 1761 | Chr4: 6319928-6321688 | A. thaliana | DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) | NULL | DNAJ heat shock N-terminal domain-containing protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G10120.1 | 4482 | Chr4: 6313914-6320086 |
AT4G10120.3 | 4581 | Chr4: 6313914-6320094 |
AT4G10120.4 | 3760 | Chr4: 6314755-6319985 |
AT4G10120.2 | 3489 | Chr4: 6314774-6319943 |
AT4G10120.5 | 2790 | Chr4: 6315951-6319985 |
AT4G10130.2 | 1424 | Chr4: 6319928-6321670 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G10120:three_prime_UTR:3 | 301 | Chr4: 6319786-6320086 | Arabidopsis thaliana |
AT4G10120:three_prime_UTR:4 | 309 | Chr4: 6319786-6320094 | Arabidopsis thaliana |
AT4G10120:three_prime_UTR:1 | 158 | Chr4: 6319786-6319943 | Arabidopsis thaliana |
AT4G10120:three_prime_UTR:2 | 200 | Chr4: 6319786-6319985 | Arabidopsis thaliana |
AT4G10130:three_prime_UTR:7 | 166 | Chr4: 6319928-6320093 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
SPSA4_ARATH | function | Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate (By similarity). Involved in the regulation of carbon partitioning in the leaves of plants (By similarity). May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf (By similarity). Plays a role for sucrose availability that is essential for plant growth and fiber elongation (By similarity). |
A0A1P8B6E2_ARATH A0A1P8B6D9_ARATH | function | Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. |
A0A1P8B6E2_ARATH A0A1P8B6D9_ARATH SPSA4_ARATH | pathway | Glycan biosynthesis; sucrose biosynthesis; sucrose from D-fructose 6-phosphate and UDP-alpha-D-glucose: step 1/2. |
A0A1P8B6E2_ARATH A0A1P8B6D9_ARATH SPSA4_ARATH | similarity | Belongs to the glycosyltransferase 1 family. |
Function
Gene Ontology
cellular component | |
---|---|
cytosol | ECO |
molecular function | |
sucrose-phosphate synthase activity | ECO |
sucrose synthase activity | ECO |
biological process | |
sucrose biosynthetic process | ECO |
Interactions
Interaction Network
Show the following interaction types:
Reset view
Show in table format
Export graph
- Click on a gene to get more info about it.
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
---|
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...