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Gene : AT4G08520 A. thaliana

DB identifier  ? AT4G08520 Secondary Identifier  ? locus:2133569
Brief Description  SNARE-like superfamily protein
TAIR Computational Description  SNARE-like superfamily protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  SNARE-like superfamily protein

0 Gene Rifs

1 Organism

9 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3431  
Location: Chr4:5417209-5420639

Gene models - AT4G08520 AT4G08520

? Gene models

Transcripts: 1  Exons: 7  Introns: 6 

Overlapping Features

? Genome features that overlap coordinates of this Gene

8 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
COPZ3_ARATH function The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity). The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex (By similarity).
COPZ3_ARATH similarity Belongs to the adaptor complexes small subunit family.
COPZ3_ARATH subcellular location The coatomer is cytoplasmic or polymerized on the cytoplasmic side of the Golgi, as well as on the vesicles/buds originating from it.

1 Proteins

Function

Gene Ontology

cellular component
cytosol  ? ECO  
plasma membrane  ? ECO  
COPI vesicle coat  ? ECO  
Golgi membrane  ? ECO  
molecular function
No terms in this category.
biological process
protein transport  ? ECO  
retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets