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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G04940:CDS:19 | 150 | Chr4: 2511212-2511361 | Arabidopsis thaliana |
AT4G04940:CDS:18 | 215 | Chr4: 2511472-2511686 | Arabidopsis thaliana |
AT4G04940:CDS:17 | 226 | Chr4: 2511780-2512005 | Arabidopsis thaliana |
AT4G04940:CDS:16 | 265 | Chr4: 2512100-2512364 | Arabidopsis thaliana |
AT4G04940:CDS:15 | 295 | Chr4: 2512461-2512755 | Arabidopsis thaliana |
AT4G04940:CDS:14 | 85 | Chr4: 2512883-2512967 | Arabidopsis thaliana |
AT4G04940:CDS:13 | 213 | Chr4: 2513089-2513301 | Arabidopsis thaliana |
AT4G04940:CDS:12 | 140 | Chr4: 2513581-2513720 | Arabidopsis thaliana |
AT4G04940:CDS:11 | 43 | Chr4: 2514082-2514124 | Arabidopsis thaliana |
AT4G04940:CDS:10 | 66 | Chr4: 2514319-2514384 | Arabidopsis thaliana |
AT4G04940:CDS:9 | 73 | Chr4: 2514857-2514929 | Arabidopsis thaliana |
AT4G04940:CDS:8 | 83 | Chr4: 2515207-2515289 | Arabidopsis thaliana |
AT4G04940:CDS:7 | 176 | Chr4: 2515375-2515550 | Arabidopsis thaliana |
AT4G04940:CDS:6 | 244 | Chr4: 2515933-2516176 | Arabidopsis thaliana |
AT4G04940:CDS:4 | 204 | Chr4: 2516285-2516488 | Arabidopsis thaliana |
AT4G04940:CDS:3 | 101 | Chr4: 2516582-2516682 | Arabidopsis thaliana |
AT4G04940:CDS:2 | 28 | Chr4: 2516817-2516844 | Arabidopsis thaliana |
AT4G04940:CDS:1 | 126 | Chr4: 2516927-2517052 | Arabidopsis thaliana |
AT4G04940:CDS:19.1 | 150 | Chr4: 2511212-2511361 | Arabidopsis thaliana |
AT4G04940:CDS:18.1 | 215 | Chr4: 2511472-2511686 | Arabidopsis thaliana |
AT4G04940:CDS:17.1 | 226 | Chr4: 2511780-2512005 | Arabidopsis thaliana |
AT4G04940:CDS:16.1 | 265 | Chr4: 2512100-2512364 | Arabidopsis thaliana |
AT4G04940:CDS:15.1 | 295 | Chr4: 2512461-2512755 | Arabidopsis thaliana |
AT4G04940:CDS:14.1 | 85 | Chr4: 2512883-2512967 | Arabidopsis thaliana |
AT4G04940:CDS:13.1 | 213 | Chr4: 2513089-2513301 | Arabidopsis thaliana |
AT4G04940:CDS:12.1 | 140 | Chr4: 2513581-2513720 | Arabidopsis thaliana |
AT4G04940:CDS:11.1 | 43 | Chr4: 2514082-2514124 | Arabidopsis thaliana |
AT4G04940:CDS:10.1 | 66 | Chr4: 2514319-2514384 | Arabidopsis thaliana |
AT4G04940:CDS:9.1 | 73 | Chr4: 2514857-2514929 | Arabidopsis thaliana |
AT4G04940:CDS:8.1 | 83 | Chr4: 2515207-2515289 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G04930:exon:2 | 1046 | Chr4: 2510100-2511145 | Arabidopsis thaliana |
AT4G04940:exon:20 | 334 | Chr4: 2511028-2511361 | Arabidopsis thaliana |
AT4G04940:exon:4 | 101 | Chr4: 2516582-2516682 | Arabidopsis thaliana |
AT4G04940:exon:2 | 28 | Chr4: 2516817-2516844 | Arabidopsis thaliana |
AT4G04940:exon:1 | 291 | Chr4: 2516927-2517217 | Arabidopsis thaliana |
AT4G04940:exon:19 | 150 | Chr4: 2511212-2511361 | Arabidopsis thaliana |
AT4G04940:exon:18 | 215 | Chr4: 2511472-2511686 | Arabidopsis thaliana |
AT4G04940:exon:17 | 226 | Chr4: 2511780-2512005 | Arabidopsis thaliana |
AT4G04940:exon:16 | 265 | Chr4: 2512100-2512364 | Arabidopsis thaliana |
AT4G04940:exon:15 | 295 | Chr4: 2512461-2512755 | Arabidopsis thaliana |
AT4G04940:exon:14 | 85 | Chr4: 2512883-2512967 | Arabidopsis thaliana |
AT4G04940:exon:13 | 213 | Chr4: 2513089-2513301 | Arabidopsis thaliana |
AT4G04940:exon:12 | 140 | Chr4: 2513581-2513720 | Arabidopsis thaliana |
AT4G04940:exon:11 | 43 | Chr4: 2514082-2514124 | Arabidopsis thaliana |
AT4G04940:exon:10 | 66 | Chr4: 2514319-2514384 | Arabidopsis thaliana |
AT4G04940:exon:9 | 73 | Chr4: 2514857-2514929 | Arabidopsis thaliana |
AT4G04940:exon:8 | 83 | Chr4: 2515207-2515289 | Arabidopsis thaliana |
AT4G04940:exon:7 | 176 | Chr4: 2515375-2515550 | Arabidopsis thaliana |
AT4G04940:exon:6 | 244 | Chr4: 2515933-2516176 | Arabidopsis thaliana |
AT4G04940:exon:5 | 204 | Chr4: 2516285-2516488 | Arabidopsis thaliana |
AT4G04940:exon:3 | 122 | Chr4: 2516582-2516703 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G04940:five_prime_UTR:1 | 165 | Chr4: 2517053-2517217 | Arabidopsis thaliana |
AT4G04940:five_prime_UTR:3 | 87 | Chr4: 2516402-2516488 | Arabidopsis thaliana |
AT4G04940:five_prime_UTR:2 | 122 | Chr4: 2516582-2516703 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G04930 | locus:2135388 | DES-1-LIKE | 2093 | Chr4: 2509053-2511145 | A. thaliana | fatty acid desaturase family protein;(source:Araport11) | Encodes a sphingolipid delta4-desaturase, involved in sphingolipid biosynthesis. Specifically expressed in floral tissues. Knockout mutants were devoid of sphinga-4,8-dienine in floral tissues. | fatty acid desaturase family protein | DES-1-LIKE |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G04930.1 | 1409 | Chr4: 2509053-2511145 |
AT4G04940.1 | 3082 | Chr4: 2511028-2517217 |
AT4G04940.2 | 2600 | Chr4: 2511212-2516703 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G04930:three_prime_UTR:1 | 227 | Chr4: 2510919-2511145 | Arabidopsis thaliana |
AT4G04940:three_prime_UTR:1 | 184 | Chr4: 2511028-2511211 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
small-subunit processome | ECO |
nucleus | ECO |
molecular function | |
No terms in this category. | |
biological process | |
rRNA processing | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...