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Gene : AOP3 A. thaliana

DB identifier  ? AT4G03050 Secondary Identifier  ? locus:2139370
Brief Description  2-oxoglutarate-dependent dioxygenase
TAIR Computational Description  2-oxoglutarate-dependent dioxygenase;(source:Araport11)
TAIR Curator Summary  The transcribed allele in ecotype Ler encodes a 2-oxoglutarate-dependent dioxygenase which is involved in glucosinolate biosynthesis. AOP3 is transcriptionally silent in leaf tissues of ecotype Col.The natural variation in this locus explains the diversification of hydroxyalkyl glucosinolates among different ecotypes of Arabidopsis.
TAIR Short Description  2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR Aliases  AOP3

0 Gene Rifs

1 Organism

9 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2592  
Location: Chr4:1343845-1346436

Gene models - AOP3 AT4G03050

? Gene models

Transcripts: 2  Exons: 10  Introns: 8 

Overlapping Features

? Genome features that overlap coordinates of this Gene

9 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
AOP3C_ARATH function 2-oxoglutarate-dependent dioxygenase involved in glucosinolates biosynthesis. Catalyzes the conversion of methylsulfinylalkyl glucosinolates to hydroxyalkyl glucosinolates (By similarity).
AOP3C_ARATH similarity Belongs to the iron/ascorbate-dependent oxidoreductase family.
AOP3C_ARATH tissue specificity Not expressed.

1 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
2-oxoglutarate-dependent dioxygenase activity  ? ECO  
metal ion binding  ? ECO  
biological process
glucosinolate biosynthetic process  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets