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Gene : BSM A. thaliana

DB identifier  ? AT4G02990 Secondary Identifier  ? locus:2139394
Name  ? BELAYA SMERT Brief Description  Mitochondrial transcription termination factor family protein
TAIR Computational Description  Mitochondrial transcription termination factor family protein;(source:Araport11)
TAIR Curator Summary  Encodes BELAYA SMERT (BSM), a plastid-localized protein homologous to mitochondrial transcription termination factors (mTERF) found in animal. Mutant bsm cells are albino, are compromised in growth, and suffer defects in global plastidic gene expression. The mRNA is cell-to-cell mobile.
TAIR Short Description  Mitochondrial transcription termination factor family protein
TAIR Aliases  BSM, RUG2

2 Gene Rifs

1 Organism

11 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2305  
Location: Chr4:1321758-1324062

Gene models - BSM AT4G02990

? Gene models

Transcripts: 2  Exons: 4  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

6 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
MTEF4_ARATH function Transcription termination factor required for processing and steady-state levels of plastid transcripts. Required for splicing of the chloroplastic Clp protease (ClpP) group IIa intron. Required for maturation of 16S rRNA and 23S rRNA in the chloroplast. Essential for embryogenesis (PubMed:21464319). Required for the maintenance of the correct levels of transcripts in the mitochondria and chloroplasts.
MTEF4_ARATH similarity Belongs to the mTERF family.

1 Proteins

Function

Gene Ontology

cellular component
plastid  ? ECO  
chloroplast  ? ECO  
mitochondrion  ? ECO  
molecular function
mRNA binding  ? ECO  
double-stranded DNA binding  ? ECO  
biological process
RNA splicing  ? ECO  
developmental process  ? ECO  
plastid rRNA transcription  ? ECO  
regulation of DNA-templated transcription  ? ECO  
DNA-templated transcription termination  ? ECO  
plastid transcription  ? ECO  
embryo development ending in seed dormancy  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets