External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G02120:CDS:1 | 118 | Chr4: 940873-940990 | Arabidopsis thaliana |
AT4G02120:CDS:2 | 80 | Chr4: 941067-941146 | Arabidopsis thaliana |
AT4G02120:CDS:3 | 87 | Chr4: 941227-941313 | Arabidopsis thaliana |
AT4G02120:CDS:4 | 169 | Chr4: 941402-941570 | Arabidopsis thaliana |
AT4G02120:CDS:5 | 57 | Chr4: 941645-941701 | Arabidopsis thaliana |
AT4G02120:CDS:6 | 65 | Chr4: 941799-941863 | Arabidopsis thaliana |
AT4G02120:CDS:7 | 84 | Chr4: 941929-942012 | Arabidopsis thaliana |
AT4G02120:CDS:8 | 51 | Chr4: 942082-942132 | Arabidopsis thaliana |
AT4G02120:CDS:9 | 63 | Chr4: 942203-942265 | Arabidopsis thaliana |
AT4G02120:CDS:10 | 47 | Chr4: 942340-942386 | Arabidopsis thaliana |
AT4G02120:CDS:11 | 70 | Chr4: 942474-942543 | Arabidopsis thaliana |
AT4G02120:CDS:13 | 63 | Chr4: 942610-942672 | Arabidopsis thaliana |
AT4G02120:CDS:14 | 90 | Chr4: 942738-942827 | Arabidopsis thaliana |
AT4G02120:CDS:15 | 39 | Chr4: 942915-942953 | Arabidopsis thaliana |
AT4G02120:CDS:16 | 150 | Chr4: 943015-943164 | Arabidopsis thaliana |
AT4G02120:CDS:17 | 78 | Chr4: 943249-943326 | Arabidopsis thaliana |
AT4G02120:CDS:18 | 86 | Chr4: 943411-943496 | Arabidopsis thaliana |
AT4G02120:CDS:20 | 49 | Chr4: 943579-943627 | Arabidopsis thaliana |
AT4G02120:CDS:22 | 81 | Chr4: 943707-943787 | Arabidopsis thaliana |
AT4G02120:CDS:23 | 94 | Chr4: 943867-943960 | Arabidopsis thaliana |
AT4G02120:CDS:24 | 50 | Chr4: 944048-944097 | Arabidopsis thaliana |
AT4G02120:CDS:1.1 | 118 | Chr4: 940873-940990 | Arabidopsis thaliana |
AT4G02120:CDS:2.1 | 80 | Chr4: 941067-941146 | Arabidopsis thaliana |
AT4G02120:CDS:3.1 | 87 | Chr4: 941227-941313 | Arabidopsis thaliana |
AT4G02120:CDS:4.1 | 169 | Chr4: 941402-941570 | Arabidopsis thaliana |
AT4G02120:CDS:5.1 | 57 | Chr4: 941645-941701 | Arabidopsis thaliana |
AT4G02120:CDS:6.1 | 65 | Chr4: 941799-941863 | Arabidopsis thaliana |
AT4G02120:CDS:7.1 | 84 | Chr4: 941929-942012 | Arabidopsis thaliana |
AT4G02120:CDS:8.1 | 51 | Chr4: 942082-942132 | Arabidopsis thaliana |
AT4G02120:CDS:9.1 | 63 | Chr4: 942203-942265 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G02120:exon:1 | 270 | Chr4: 940721-940990 | Arabidopsis thaliana |
AT4G02120:exon:15 | 199 | Chr4: 942474-942672 | Arabidopsis thaliana |
AT4G02120:exon:29 | 268 | Chr4: 944048-944315 | Arabidopsis thaliana |
AT4G02120:exon:2 | 229 | Chr4: 940762-940990 | Arabidopsis thaliana |
AT4G02120:exon:24 | 209 | Chr4: 943579-943787 | Arabidopsis thaliana |
AT4G02120:exon:30 | 280 | Chr4: 944048-944327 | Arabidopsis thaliana |
AT4G02120:exon:3 | 222 | Chr4: 940769-940990 | Arabidopsis thaliana |
AT4G02120:exon:13 | 47 | Chr4: 942340-942386 | Arabidopsis thaliana |
AT4G02120:exon:14 | 70 | Chr4: 942474-942543 | Arabidopsis thaliana |
AT4G02120:exon:22 | 377 | Chr4: 943411-943787 | Arabidopsis thaliana |
AT4G02120:exon:28 | 264 | Chr4: 944048-944311 | Arabidopsis thaliana |
AT4G02120:exon:4 | 213 | Chr4: 940778-940990 | Arabidopsis thaliana |
AT4G02120:exon:5 | 80 | Chr4: 941067-941146 | Arabidopsis thaliana |
AT4G02120:exon:6 | 87 | Chr4: 941227-941313 | Arabidopsis thaliana |
AT4G02120:exon:7 | 169 | Chr4: 941402-941570 | Arabidopsis thaliana |
AT4G02120:exon:8 | 57 | Chr4: 941645-941701 | Arabidopsis thaliana |
AT4G02120:exon:9 | 65 | Chr4: 941799-941863 | Arabidopsis thaliana |
AT4G02120:exon:10 | 84 | Chr4: 941929-942012 | Arabidopsis thaliana |
AT4G02120:exon:11 | 51 | Chr4: 942082-942132 | Arabidopsis thaliana |
AT4G02120:exon:12 | 63 | Chr4: 942203-942265 | Arabidopsis thaliana |
AT4G02120:exon:16 | 63 | Chr4: 942610-942672 | Arabidopsis thaliana |
AT4G02120:exon:17 | 90 | Chr4: 942738-942827 | Arabidopsis thaliana |
AT4G02120:exon:18 | 39 | Chr4: 942915-942953 | Arabidopsis thaliana |
AT4G02120:exon:19 | 150 | Chr4: 943015-943164 | Arabidopsis thaliana |
AT4G02120:exon:20 | 78 | Chr4: 943249-943326 | Arabidopsis thaliana |
AT4G02120:exon:21 | 86 | Chr4: 943411-943496 | Arabidopsis thaliana |
AT4G02120:exon:23 | 49 | Chr4: 943579-943627 | Arabidopsis thaliana |
AT4G02120:exon:25 | 81 | Chr4: 943707-943787 | Arabidopsis thaliana |
AT4G02120:exon:26 | 94 | Chr4: 943867-943960 | Arabidopsis thaliana |
AT4G02120:exon:27 | 245 | Chr4: 944048-944292 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G02120:five_prime_UTR:1 | 152 | Chr4: 940721-940872 | Arabidopsis thaliana |
AT4G02120:five_prime_UTR:2 | 111 | Chr4: 940762-940872 | Arabidopsis thaliana |
AT4G02120:five_prime_UTR:3 | 104 | Chr4: 940769-940872 | Arabidopsis thaliana |
AT4G02120:five_prime_UTR:4 | 95 | Chr4: 940778-940872 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G02130 | locus:2132218 | GATL6 | galacturonosyltransferase 6 | 2926 | Chr4: 944324-947249 | A. thaliana | galacturonosyltransferase 6;(source:Araport11) | Encodes a protein with putative galacturonosyltransferase activity. | galacturonosyltransferase 6 | GATL6, LGT10 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G02120.1 | 2041 | Chr4: 940721-944315 |
AT4G02120.2 | 2107 | Chr4: 940721-944315 |
AT4G02120.3 | 2091 | Chr4: 940762-944327 |
AT4G02120.4 | 2150 | Chr4: 940769-944311 |
AT4G02120.5 | 1844 | Chr4: 940778-944292 |
AT4G02130.1 | 1900 | Chr4: 944324-947249 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G02120:three_prime_UTR:7 | 218 | Chr4: 944098-944315 | Arabidopsis thaliana |
AT4G02120:three_prime_UTR:2 | 151 | Chr4: 943637-943787 | Arabidopsis thaliana |
AT4G02120:three_prime_UTR:5 | 280 | Chr4: 944048-944327 | Arabidopsis thaliana |
AT4G02120:three_prime_UTR:1 | 287 | Chr4: 943501-943787 | Arabidopsis thaliana |
AT4G02120:three_prime_UTR:3 | 94 | Chr4: 943867-943960 | Arabidopsis thaliana |
AT4G02120:three_prime_UTR:4 | 264 | Chr4: 944048-944311 | Arabidopsis thaliana |
AT4G02120:three_prime_UTR:6 | 195 | Chr4: 944098-944292 | Arabidopsis thaliana |
AT4G02130:three_prime_UTR:4 | 406 | Chr4: 944324-944729 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A1P8B6F8_ARATH A0A1P8B6G0_ARATH A0A1P8B6F9_ARATH Q8L6Z9_ARATH A0A1P8B6G6_ARATH | function | Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. |
A0A1P8B6F8_ARATH A0A1P8B6G0_ARATH A0A1P8B6F9_ARATH Q8L6Z9_ARATH A0A1P8B6G6_ARATH | pathway | Pyrimidine metabolism; CTP biosynthesis via de novo pathway; CTP from UDP: step 2/2. |
A0A1P8B6F8_ARATH A0A1P8B6G0_ARATH A0A1P8B6F9_ARATH Q8L6Z9_ARATH A0A1P8B6G6_ARATH | similarity | Belongs to the CTP synthase family. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
ATP binding | ECO |
identical protein binding | ECO |
CTP synthase activity | ECO |
biological process | |
'de novo' CTP biosynthetic process | ECO |
pyrimidine nucleobase biosynthetic process | ECO |
CTP biosynthetic process | ECO |
glutamine metabolic process | ECO |
Interactions
Interaction Network
Show the following interaction types:
Reset view
Show in table format
Export graph
- Click on a gene to get more info about it.
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
---|
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...