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Gene : AT4G01810 A. thaliana

DB identifier  ? AT4G01810 Secondary Identifier  ? locus:2141340
Brief Description  Sec23/Sec24 protein transport family protein
TAIR Computational Description  Sec23/Sec24 protein transport family protein;(source:Araport11)
TAIR Curator Summary  Sec23 homolog , forms a distinct clade with SEC23D.Mutants have defects in pollen exine patterning, tapetal development and pollen intine formation.
TAIR Short Description  Sec23/Sec24 protein transport family protein
TAIR Aliases  AtSEC23A

0 Gene Rifs

1 Organism

12 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3942  
Location: Chr4:776414-780355 reverse strand

Gene models - AT4G01810 AT4G01810

? Gene models

Transcripts: 3  Exons: 17  Introns: 14 

Overlapping Features

? Genome features that overlap coordinates of this Gene

12 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SC23A_ARATH developmental stage Detected in the whole seedling except the hypocotyl (PubMed:29390074). Observed in all floral organs, including sepals, petals, filaments, anther walls, mature pollen grains, pollen tubes and young siliques (PubMed:29390074). Highly expressed in the anther tapetum at uninucleate and bicellular stages (PubMed:29390074).
SC23A_ARATH function Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER) (By similarity). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules (By similarity). May contribute to COPII-coated vesicles formation and ER-Golgi vesicle transport (PubMed:29390074). Together with SEC23D, essential for pollen wall development and exine patterning, probably by regulating endoplasmic reticulum (ER) export of lipids and proteins (e.g. sporopollenin) necessary for pollen wall formation (PubMed:29390074). Also involved in plastid physiology in anther tapetal cells (PubMed:29390074).
SC23A_ARATH similarity Belongs to the SEC23/SEC24 family. SEC24 subfamily.
SC23A_ARATH subcellular location Observed at endoplasmic reticulum exit sites (ERESs), characteristic for COPII-coated vesicles localization.
SC23A_ARATH tissue specificity Mostly expressed in seedlings, roots, cotyledons, leaves, trichomes, leaf primordia and flowers, and, to a lower extent, in mature siliques.

1 Proteins

Function

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets