External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G00440:CDS:1 | 136 | Chr4: 195176-195311 | Arabidopsis thaliana |
AT4G00440:CDS:2 | 71 | Chr4: 195401-195471 | Arabidopsis thaliana |
AT4G00440:CDS:3 | 1354 | Chr4: 195562-196915 | Arabidopsis thaliana |
AT4G00440:CDS:4 | 131 | Chr4: 196991-197121 | Arabidopsis thaliana |
AT4G00440:CDS:5 | 187 | Chr4: 197230-197416 | Arabidopsis thaliana |
AT4G00440:CDS:7 | 617 | Chr4: 197503-198119 | Arabidopsis thaliana |
AT4G00440:CDS:1.1 | 136 | Chr4: 195176-195311 | Arabidopsis thaliana |
AT4G00440:CDS:2.1 | 71 | Chr4: 195401-195471 | Arabidopsis thaliana |
AT4G00440:CDS:3.1 | 1354 | Chr4: 195562-196915 | Arabidopsis thaliana |
AT4G00440:CDS:4.1 | 131 | Chr4: 196991-197121 | Arabidopsis thaliana |
AT4G00440:CDS:5.1 | 187 | Chr4: 197230-197416 | Arabidopsis thaliana |
AT4G00440:CDS:6 | 610 | Chr4: 197503-198112 | Arabidopsis thaliana |
AT4G00440:CDS:9 | 10 | Chr4: 198212-198221 | Arabidopsis thaliana |
AT4G00440:CDS:1.2 | 136 | Chr4: 195176-195311 | Arabidopsis thaliana |
AT4G00440:CDS:2.2 | 71 | Chr4: 195401-195471 | Arabidopsis thaliana |
AT4G00440:CDS:3.2 | 1354 | Chr4: 195562-196915 | Arabidopsis thaliana |
AT4G00440:CDS:4.2 | 131 | Chr4: 196991-197121 | Arabidopsis thaliana |
AT4G00440:CDS:5.2 | 187 | Chr4: 197230-197416 | Arabidopsis thaliana |
AT4G00440:CDS:6.1 | 610 | Chr4: 197503-198112 | Arabidopsis thaliana |
AT4G00440:CDS:9.1 | 10 | Chr4: 198212-198221 | Arabidopsis thaliana |
AT4G00440:CDS:1.3 | 136 | Chr4: 195176-195311 | Arabidopsis thaliana |
AT4G00440:CDS:2.3 | 71 | Chr4: 195401-195471 | Arabidopsis thaliana |
AT4G00440:CDS:3.3 | 1354 | Chr4: 195562-196915 | Arabidopsis thaliana |
AT4G00440:CDS:4.3 | 131 | Chr4: 196991-197121 | Arabidopsis thaliana |
AT4G00440:CDS:5.3 | 187 | Chr4: 197230-197416 | Arabidopsis thaliana |
AT4G00440:CDS:6.2 | 610 | Chr4: 197503-198112 | Arabidopsis thaliana |
AT4G00440:CDS:8 | 19 | Chr4: 198207-198225 | Arabidopsis thaliana |
AT4G00440:CDS:1.4 | 136 | Chr4: 195176-195311 | Arabidopsis thaliana |
AT4G00440:CDS:2.4 | 71 | Chr4: 195401-195471 | Arabidopsis thaliana |
AT4G00440:CDS:3.4 | 1354 | Chr4: 195562-196915 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G00440:exon:1 | 1140 | Chr4: 193528-194667 | Arabidopsis thaliana |
AT4G00440:exon:14 | 368 | Chr4: 198212-198579 | Arabidopsis thaliana |
AT4G00440:exon:2 | 77 | Chr4: 193605-193681 | Arabidopsis thaliana |
AT4G00440:exon:3 | 873 | Chr4: 193795-194667 | Arabidopsis thaliana |
AT4G00440:exon:15 | 371 | Chr4: 198212-198582 | Arabidopsis thaliana |
AT4G00440:exon:4 | 789 | Chr4: 193879-194667 | Arabidopsis thaliana |
AT4G00440:exon:11 | 610 | Chr4: 197503-198112 | Arabidopsis thaliana |
AT4G00440:exon:13 | 373 | Chr4: 198207-198579 | Arabidopsis thaliana |
AT4G00440:exon:5 | 44 | Chr4: 194985-195028 | Arabidopsis thaliana |
AT4G00440:exon:6 | 193 | Chr4: 195119-195311 | Arabidopsis thaliana |
AT4G00440:exon:7 | 71 | Chr4: 195401-195471 | Arabidopsis thaliana |
AT4G00440:exon:8 | 1354 | Chr4: 195562-196915 | Arabidopsis thaliana |
AT4G00440:exon:9 | 131 | Chr4: 196991-197121 | Arabidopsis thaliana |
AT4G00440:exon:10 | 187 | Chr4: 197230-197416 | Arabidopsis thaliana |
AT4G00440:exon:12 | 1077 | Chr4: 197503-198579 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G00440:five_prime_UTR:1 | 1140 | Chr4: 193528-194667 | Arabidopsis thaliana |
AT4G00440:five_prime_UTR:2 | 77 | Chr4: 193605-193681 | Arabidopsis thaliana |
AT4G00440:five_prime_UTR:3 | 873 | Chr4: 193795-194667 | Arabidopsis thaliana |
AT4G00440:five_prime_UTR:4 | 789 | Chr4: 193879-194667 | Arabidopsis thaliana |
AT4G00440:five_prime_UTR:5 | 44 | Chr4: 194985-195028 | Arabidopsis thaliana |
AT4G00440:five_prime_UTR:6 | 57 | Chr4: 195119-195175 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G00440.1 | 4153 | Chr4: 193528-198579 |
AT4G00440.4 | 4054 | Chr4: 193528-198579 |
AT4G00440.3 | 3867 | Chr4: 193605-198582 |
AT4G00440.2 | 3708 | Chr4: 193879-198579 |
AT4G00440.5 | 3057 | Chr4: 194985-198579 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G00440:three_prime_UTR:2 | 358 | Chr4: 198222-198579 | Arabidopsis thaliana |
AT4G00440:three_prime_UTR:3 | 361 | Chr4: 198222-198582 | Arabidopsis thaliana |
AT4G00440:three_prime_UTR:4 | 354 | Chr4: 198226-198579 | Arabidopsis thaliana |
AT4G00440:three_prime_UTR:1 | 460 | Chr4: 198120-198579 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
Reset view
Show in table format
Export graph
- Click on a gene to get more info about it.
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
---|
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...