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Gene : PIL2 A. thaliana

DB identifier  ? AT3G62090 Secondary Identifier  ? locus:2098008
Name  ? phytochrome interacting factor 3-like 2 Brief Description  phytochrome interacting factor 3-like 2
TAIR Computational Description  phytochrome interacting factor 3-like 2;(source:Araport11)
TAIR Curator Summary  encodes a novel Myc-related bHLH transcription factor, which physically associated with APRR1/TOC1 and is a member of PIF3 transcription factor family.
TAIR Short Description  phytochrome interacting factor 3-like 2
TAIR Aliases  PIF6, PIL2

4 Gene Rifs

1 Organism

26 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2163  
Location: Chr3:22988547-22990709 reverse strand

Gene models - PIL2 AT3G62090

? Gene models

Transcripts: 4  Exons: 20  Introns: 16 

Overlapping Features

? Genome features that overlap coordinates of this Gene

12 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

0 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PIF6_ARATH-2 PIF6_ARATH developmental stage Accumulates progressively in maturating seeds to reach a peak in dry seeds (PubMed:23708772). Fades out upon seed imbibition (PubMed:23708772).
PIF6_ARATH-2 PIF6_ARATH function Transcription factor.
PIF6_ARATH-2 PIF6_ARATH tissue specificity Mainly expressed in fruits and flowers and, to a lower extent, in leaves, stems, seedlings and roots.

5 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
DNA-binding transcription factor activity  ? ECO  
DNA binding  ? ECO  
protein dimerization activity  ? ECO  
biological process
red or far-red light signaling pathway  ? ECO  
response to abscisic acid  ? ECO  
response to salt  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets