Lists
This Gene is in one list:
External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G60740:CDS:19 | 291 | Chr3: 22447385-22447675 | Arabidopsis thaliana |
AT3G60740:CDS:18 | 186 | Chr3: 22447764-22447949 | Arabidopsis thaliana |
AT3G60740:CDS:15 | 45 | Chr3: 22448031-22448075 | Arabidopsis thaliana |
AT3G60740:CDS:14 | 270 | Chr3: 22448142-22448411 | Arabidopsis thaliana |
AT3G60740:CDS:13 | 510 | Chr3: 22448499-22449008 | Arabidopsis thaliana |
AT3G60740:CDS:12 | 222 | Chr3: 22449108-22449329 | Arabidopsis thaliana |
AT3G60740:CDS:11 | 206 | Chr3: 22449413-22449618 | Arabidopsis thaliana |
AT3G60740:CDS:10 | 199 | Chr3: 22449810-22450008 | Arabidopsis thaliana |
AT3G60740:CDS:9 | 216 | Chr3: 22450231-22450446 | Arabidopsis thaliana |
AT3G60740:CDS:8 | 171 | Chr3: 22450543-22450713 | Arabidopsis thaliana |
AT3G60740:CDS:7 | 105 | Chr3: 22450836-22450940 | Arabidopsis thaliana |
AT3G60740:CDS:6 | 117 | Chr3: 22451042-22451158 | Arabidopsis thaliana |
AT3G60740:CDS:5 | 183 | Chr3: 22451488-22451670 | Arabidopsis thaliana |
AT3G60740:CDS:4 | 177 | Chr3: 22451830-22452006 | Arabidopsis thaliana |
AT3G60740:CDS:3 | 103 | Chr3: 22452206-22452308 | Arabidopsis thaliana |
AT3G60740:CDS:2 | 548 | Chr3: 22452464-22453011 | Arabidopsis thaliana |
AT3G60740:CDS:1 | 216 | Chr3: 22453110-22453325 | Arabidopsis thaliana |
AT3G60740:CDS:19.1 | 291 | Chr3: 22447385-22447675 | Arabidopsis thaliana |
AT3G60740:CDS:18.1 | 186 | Chr3: 22447764-22447949 | Arabidopsis thaliana |
AT3G60740:CDS:15.1 | 45 | Chr3: 22448031-22448075 | Arabidopsis thaliana |
AT3G60740:CDS:14.1 | 270 | Chr3: 22448142-22448411 | Arabidopsis thaliana |
AT3G60740:CDS:13.1 | 510 | Chr3: 22448499-22449008 | Arabidopsis thaliana |
AT3G60740:CDS:12.1 | 222 | Chr3: 22449108-22449329 | Arabidopsis thaliana |
AT3G60740:CDS:11.1 | 206 | Chr3: 22449413-22449618 | Arabidopsis thaliana |
AT3G60740:CDS:10.1 | 199 | Chr3: 22449810-22450008 | Arabidopsis thaliana |
AT3G60740:CDS:9.1 | 216 | Chr3: 22450231-22450446 | Arabidopsis thaliana |
AT3G60740:CDS:8.1 | 171 | Chr3: 22450543-22450713 | Arabidopsis thaliana |
AT3G60740:CDS:7.1 | 105 | Chr3: 22450836-22450940 | Arabidopsis thaliana |
AT3G60740:CDS:6.1 | 117 | Chr3: 22451042-22451158 | Arabidopsis thaliana |
AT3G60740:CDS:5.1 | 183 | Chr3: 22451488-22451670 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G60730:exon:5 | 415 | Chr3: 22446859-22447273 | Arabidopsis thaliana |
AT3G60740:exon:22 | 431 | Chr3: 22447245-22447675 | Arabidopsis thaliana |
AT3G60740:exon:2 | 412 | Chr3: 22453110-22453521 | Arabidopsis thaliana |
AT3G60740:exon:21 | 291 | Chr3: 22447385-22447675 | Arabidopsis thaliana |
AT3G60740:exon:20 | 186 | Chr3: 22447764-22447949 | Arabidopsis thaliana |
AT3G60740:exon:17 | 45 | Chr3: 22448031-22448075 | Arabidopsis thaliana |
AT3G60740:exon:1 | 152 | Chr3: 22453213-22453364 | Arabidopsis thaliana |
AT3G60740:exon:19 | 14 | Chr3: 22447936-22447949 | Arabidopsis thaliana |
AT3G60740:exon:18 | 25 | Chr3: 22448031-22448055 | Arabidopsis thaliana |
AT3G60740:exon:16 | 270 | Chr3: 22448142-22448411 | Arabidopsis thaliana |
AT3G60740:exon:15 | 510 | Chr3: 22448499-22449008 | Arabidopsis thaliana |
AT3G60740:exon:14 | 222 | Chr3: 22449108-22449329 | Arabidopsis thaliana |
AT3G60740:exon:13 | 206 | Chr3: 22449413-22449618 | Arabidopsis thaliana |
AT3G60740:exon:12 | 199 | Chr3: 22449810-22450008 | Arabidopsis thaliana |
AT3G60740:exon:11 | 216 | Chr3: 22450231-22450446 | Arabidopsis thaliana |
AT3G60740:exon:10 | 171 | Chr3: 22450543-22450713 | Arabidopsis thaliana |
AT3G60740:exon:9 | 105 | Chr3: 22450836-22450940 | Arabidopsis thaliana |
AT3G60740:exon:8 | 117 | Chr3: 22451042-22451158 | Arabidopsis thaliana |
AT3G60740:exon:7 | 183 | Chr3: 22451488-22451670 | Arabidopsis thaliana |
AT3G60740:exon:6 | 177 | Chr3: 22451830-22452006 | Arabidopsis thaliana |
AT3G60740:exon:5 | 103 | Chr3: 22452206-22452308 | Arabidopsis thaliana |
AT3G60740:exon:4 | 548 | Chr3: 22452464-22453011 | Arabidopsis thaliana |
AT3G60740:exon:3 | 255 | Chr3: 22453110-22453364 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G60740:five_prime_UTR:1 | 196 | Chr3: 22453326-22453521 | Arabidopsis thaliana |
AT3G60740:five_prime_UTR:3 | 152 | Chr3: 22453213-22453364 | Arabidopsis thaliana |
AT3G60740:five_prime_UTR:2 | 39 | Chr3: 22453326-22453364 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G60730 | locus:2101836 | AT3G60730 | 2384 | Chr3: 22444890-22447273 | A. thaliana | Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) | Pectin methylesterase inhibitor; INVI-PMEI protein isoform which clustered with a PME. | Plant invertase/pectin methylesterase inhibitor superfamily | PMEI-PME65 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G60730.1 | 1672 | Chr3: 22444890-22447273 |
AT3G60740.1 | 4101 | Chr3: 22447245-22453521 |
AT3G60740.2 | 3701 | Chr3: 22447385-22453364 |
AT3G60740.3 | 3321 | Chr3: 22447936-22453364 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G60730:three_prime_UTR:1 | 47 | Chr3: 22447227-22447273 | Arabidopsis thaliana |
AT3G60740:three_prime_UTR:1 | 140 | Chr3: 22447245-22447384 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
TBCD_ARATH | function | Regulates microtubule function in seed development. Required for development of both embryo and endosperm tissue. Not essential for cell viability. Probably involved in the binding of beta-tubulin in the multimeric supercomplex. |
TBCD_ARATH | similarity | Belongs to the TBCD family. |
Function
Gene Ontology
cellular component | |
---|---|
plasmodesma | ECO |
molecular function | |
GTPase activator activity | ECO |
beta-tubulin binding | ECO |
tubulin binding | ECO |
biological process | |
post-chaperonin tubulin folding pathway | ECO |
microtubule cytoskeleton organization | ECO |
tubulin complex assembly | ECO |
protein folding | ECO |
microtubule-based process | ECO |
embryo development ending in seed dormancy | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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