help  | faq  | software  | BAR
Hide

Oops!

Error: 403
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect
Hide Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.

Gene : AT3G60650 A. thaliana

DB identifier  ? AT3G60650 Secondary Identifier  ? locus:2101831
Brief Description  transmembrane protein
TAIR Computational Description  transmembrane protein;(source:Araport11)
TAIR Curator Summary  Encodes a peptide involved in the regulation of lateral root development and root growth pattern.
TAIR Short Description  NULL

0 Gene Rifs

1 Organism

4 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1403  
Location: Chr3:22419115-22420517

Gene models - AT3G60650 AT3G60650

? Gene models

Transcripts: 1  Exons: 2  Introns: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

3 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
RGF10_ARATH developmental stage Expressed specifically in the quiescent center (QC) of the root apical meristem (RAM).
RGF10_ARATH function Maintains the postembryonic root stem cell niche by regulating the expression levels and patterns of the transcription factor PLETHORA (PLT), mainly at the post-transcriptional level (By similarity). Promotes root elongation (PubMed:22815541).
RGF10_ARATH similarity Belongs to the RGF family.
RGF10_ARATH tissue specificity Expressed in root tips.

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
extracellular region  ? ECO  
molecular function
growth factor activity  ? ECO  
biological process
cell differentiation  ? ECO  
regulation of root morphogenesis  ? ECO  
regulation of root development  ? ECO  
response to auxin  ? ECO  
lateral root development  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

5 Data Sets