External Links
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- Plant Proteome Database
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- ATTED-II
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G59820:CDS:14 | 89 | Chr3: 22098306-22098394 | Arabidopsis thaliana |
AT3G59820:CDS:13 | 116 | Chr3: 22098476-22098591 | Arabidopsis thaliana |
AT3G59820:CDS:12 | 83 | Chr3: 22098673-22098755 | Arabidopsis thaliana |
AT3G59820:CDS:11 | 147 | Chr3: 22098843-22098989 | Arabidopsis thaliana |
AT3G59820:CDS:10 | 48 | Chr3: 22099063-22099110 | Arabidopsis thaliana |
AT3G59820:CDS:9 | 195 | Chr3: 22099205-22099399 | Arabidopsis thaliana |
AT3G59820:CDS:8 | 175 | Chr3: 22099508-22099682 | Arabidopsis thaliana |
AT3G59820:CDS:7 | 65 | Chr3: 22099769-22099833 | Arabidopsis thaliana |
AT3G59820:CDS:6 | 127 | Chr3: 22099948-22100074 | Arabidopsis thaliana |
AT3G59820:CDS:5 | 93 | Chr3: 22100161-22100253 | Arabidopsis thaliana |
AT3G59820:CDS:4 | 89 | Chr3: 22100350-22100438 | Arabidopsis thaliana |
AT3G59820:CDS:3 | 147 | Chr3: 22100538-22100684 | Arabidopsis thaliana |
AT3G59820:CDS:2 | 313 | Chr3: 22100779-22101091 | Arabidopsis thaliana |
AT3G59820:CDS:1 | 581 | Chr3: 22101179-22101759 | Arabidopsis thaliana |
AT3G59820:CDS:14.1 | 89 | Chr3: 22098306-22098394 | Arabidopsis thaliana |
AT3G59820:CDS:13.1 | 116 | Chr3: 22098476-22098591 | Arabidopsis thaliana |
AT3G59820:CDS:12.1 | 83 | Chr3: 22098673-22098755 | Arabidopsis thaliana |
AT3G59820:CDS:11.1 | 147 | Chr3: 22098843-22098989 | Arabidopsis thaliana |
AT3G59820:CDS:10.1 | 48 | Chr3: 22099063-22099110 | Arabidopsis thaliana |
AT3G59820:CDS:9.1 | 195 | Chr3: 22099205-22099399 | Arabidopsis thaliana |
AT3G59820:CDS:8.1 | 175 | Chr3: 22099508-22099682 | Arabidopsis thaliana |
AT3G59820:CDS:7.1 | 65 | Chr3: 22099769-22099833 | Arabidopsis thaliana |
AT3G59820:CDS:6.1 | 127 | Chr3: 22099948-22100074 | Arabidopsis thaliana |
AT3G59820:CDS:5.1 | 93 | Chr3: 22100161-22100253 | Arabidopsis thaliana |
AT3G59820:CDS:4.1 | 89 | Chr3: 22100350-22100438 | Arabidopsis thaliana |
AT3G59820:CDS:3.1 | 147 | Chr3: 22100538-22100684 | Arabidopsis thaliana |
AT3G59820:CDS:2.1 | 313 | Chr3: 22100779-22101091 | Arabidopsis thaliana |
AT3G59820:CDS:1.1 | 581 | Chr3: 22101179-22101759 | Arabidopsis thaliana |
AT3G59820:CDS:14.2 | 89 | Chr3: 22098306-22098394 | Arabidopsis thaliana |
AT3G59820:CDS:13.2 | 116 | Chr3: 22098476-22098591 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G59820:exon:1 | 150 | Chr3: 22102075-22102224 | Arabidopsis thaliana |
AT3G59820:exon:20 | 416 | Chr3: 22097979-22098394 | Arabidopsis thaliana |
AT3G59820:exon:3 | 301 | Chr3: 22101924-22102224 | Arabidopsis thaliana |
AT3G59820:exon:18 | 367 | Chr3: 22098028-22098394 | Arabidopsis thaliana |
AT3G59820:exon:4 | 986 | Chr3: 22101179-22102164 | Arabidopsis thaliana |
AT3G59820:exon:19 | 365 | Chr3: 22098028-22098392 | Arabidopsis thaliana |
AT3G59820:exon:17 | 116 | Chr3: 22098476-22098591 | Arabidopsis thaliana |
AT3G59820:exon:16 | 83 | Chr3: 22098673-22098755 | Arabidopsis thaliana |
AT3G59820:exon:15 | 147 | Chr3: 22098843-22098989 | Arabidopsis thaliana |
AT3G59820:exon:14 | 48 | Chr3: 22099063-22099110 | Arabidopsis thaliana |
AT3G59820:exon:13 | 195 | Chr3: 22099205-22099399 | Arabidopsis thaliana |
AT3G59820:exon:12 | 175 | Chr3: 22099508-22099682 | Arabidopsis thaliana |
AT3G59820:exon:11 | 65 | Chr3: 22099769-22099833 | Arabidopsis thaliana |
AT3G59820:exon:10 | 127 | Chr3: 22099948-22100074 | Arabidopsis thaliana |
AT3G59820:exon:9 | 93 | Chr3: 22100161-22100253 | Arabidopsis thaliana |
AT3G59820:exon:8 | 89 | Chr3: 22100350-22100438 | Arabidopsis thaliana |
AT3G59820:exon:7 | 147 | Chr3: 22100538-22100684 | Arabidopsis thaliana |
AT3G59820:exon:6 | 313 | Chr3: 22100779-22101091 | Arabidopsis thaliana |
AT3G59820:exon:5 | 643 | Chr3: 22101179-22101821 | Arabidopsis thaliana |
AT3G59820:exon:2 | 90 | Chr3: 22102075-22102164 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G59820:five_prime_UTR:1 | 150 | Chr3: 22102075-22102224 | Arabidopsis thaliana |
AT3G59820:five_prime_UTR:3 | 301 | Chr3: 22101924-22102224 | Arabidopsis thaliana |
AT3G59820:five_prime_UTR:4 | 405 | Chr3: 22101760-22102164 | Arabidopsis thaliana |
AT3G59820:five_prime_UTR:5 | 62 | Chr3: 22101760-22101821 | Arabidopsis thaliana |
AT3G59820:five_prime_UTR:2 | 90 | Chr3: 22102075-22102164 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G59820.1 | 2807 | Chr3: 22097979-22102224 |
AT3G59820.3 | 2958 | Chr3: 22097979-22102224 |
AT3G59820.4 | 2951 | Chr3: 22098028-22102164 |
AT3G59820.2 | 2696 | Chr3: 22098028-22102164 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G59820:three_prime_UTR:3 | 327 | Chr3: 22097979-22098305 | Arabidopsis thaliana |
AT3G59820:three_prime_UTR:1 | 278 | Chr3: 22098028-22098305 | Arabidopsis thaliana |
AT3G59820:three_prime_UTR:2 | 261 | Chr3: 22098028-22098288 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
Q9M1Z2_ARATH F4J9G6_ARATH | similarity | Belongs to the LETM1 family. |
Function
Gene Ontology
cellular component | |
---|---|
cytosol | ECO |
mitochondrion | ECO |
mitochondrial inner membrane | ECO |
molecular function | |
ribosome binding | ECO |
antiporter activity | ECO |
calcium ion binding | ECO |
biological process | |
calcium ion transport | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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