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Gene : SYN3 A. thaliana

DB identifier  ? AT3G59550 Secondary Identifier  ? locus:2097548
Brief Description  Rad21/Rec8-like family protein
TAIR Computational Description  Rad21/Rec8-like family protein;(source:Araport11)
TAIR Curator Summary  Encodes an alpha-kleisin protein that is localized primarily in the nucleolus and is essential for megagametogenesis and plays an important role in pollen development. alpha-kleisins are core components of meiotic and mitotic cohesin complexes.
TAIR Short Description  Rad21/Rec8-like family protein
TAIR Aliases  ATRAD21.2, ATSYN3, SYN3

3 Gene Rifs

1 Organism

11 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3686  
Location: Chr3:21997052-22000737

Gene models - SYN3 AT3G59550

? Gene models

Transcripts: 1  Exons: 12  Introns: 11 

Overlapping Features

? Genome features that overlap coordinates of this Gene

13 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SCC13_ARATH-2 SCC13_ARATH SCC13_ARATH-3 function May be involved in sister chromatid cohesion during mitosis.
SCC13_ARATH-2 SCC13_ARATH SCC13_ARATH-3 similarity Belongs to the rad21 family.
SCC13_ARATH-2 SCC13_ARATH SCC13_ARATH-3 tissue specificity Low expression in shoots, buds, siliques, leaves and roots. Found in, but not limited to, actively dividing cells: in procambium, protoderm and ground meristem in roots, and in shoot and floral meristems.

3 Proteins

Function

Gene Ontology

cellular component
nucleolus  ? ECO  
nucleus  ? ECO  
cohesin complex  ? ECO  
molecular function
No terms in this category.
biological process
pollen development  ? ECO  
chromosome segregation  ? ECO  
megagametogenesis  ? ECO  
sister chromatid cohesion  ? ECO  
mitotic cell cycle  ? ECO  
cell division  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets