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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G59490:CDS:13 | 160 | Chr3: 21984660-21984819 | Arabidopsis thaliana |
AT3G59490:CDS:9 | 45 | Chr3: 21984905-21984949 | Arabidopsis thaliana |
AT3G59490:CDS:7 | 111 | Chr3: 21985019-21985129 | Arabidopsis thaliana |
AT3G59490:CDS:5 | 203 | Chr3: 21985221-21985423 | Arabidopsis thaliana |
AT3G59490:CDS:3 | 150 | Chr3: 21985525-21985674 | Arabidopsis thaliana |
AT3G59490:CDS:2 | 110 | Chr3: 21985755-21985864 | Arabidopsis thaliana |
AT3G59490:CDS:1 | 103 | Chr3: 21986160-21986262 | Arabidopsis thaliana |
AT3G59490:CDS:12 | 10 | Chr3: 21984802-21984811 | Arabidopsis thaliana |
AT3G59490:CDS:9.1 | 45 | Chr3: 21984905-21984949 | Arabidopsis thaliana |
AT3G59490:CDS:7.1 | 111 | Chr3: 21985019-21985129 | Arabidopsis thaliana |
AT3G59490:CDS:5.1 | 203 | Chr3: 21985221-21985423 | Arabidopsis thaliana |
AT3G59490:CDS:3.1 | 150 | Chr3: 21985525-21985674 | Arabidopsis thaliana |
AT3G59490:CDS:2.1 | 110 | Chr3: 21985755-21985864 | Arabidopsis thaliana |
AT3G59490:CDS:1.1 | 103 | Chr3: 21986160-21986262 | Arabidopsis thaliana |
AT3G59490:CDS:11 | 18 | Chr3: 21984802-21984819 | Arabidopsis thaliana |
AT3G59490:CDS:8 | 45 | Chr3: 21984905-21984949 | Arabidopsis thaliana |
AT3G59490:CDS:6 | 111 | Chr3: 21985019-21985129 | Arabidopsis thaliana |
AT3G59490:CDS:4 | 108 | Chr3: 21985316-21985423 | Arabidopsis thaliana |
AT3G59490:CDS:3.2 | 150 | Chr3: 21985525-21985674 | Arabidopsis thaliana |
AT3G59490:CDS:2.2 | 110 | Chr3: 21985755-21985864 | Arabidopsis thaliana |
AT3G59490:CDS:1.2 | 103 | Chr3: 21986160-21986262 | Arabidopsis thaliana |
AT3G59490:CDS:10 | 148 | Chr3: 21984802-21984949 | Arabidopsis thaliana |
AT3G59490:CDS:7.2 | 111 | Chr3: 21985019-21985129 | Arabidopsis thaliana |
AT3G59490:CDS:5.2 | 203 | Chr3: 21985221-21985423 | Arabidopsis thaliana |
AT3G59490:CDS:3.3 | 150 | Chr3: 21985525-21985674 | Arabidopsis thaliana |
AT3G59490:CDS:2.3 | 110 | Chr3: 21985755-21985864 | Arabidopsis thaliana |
AT3G59490:CDS:1.3 | 103 | Chr3: 21986160-21986262 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G59480:exon:4 | 287 | Chr3: 21984312-21984598 | Arabidopsis thaliana |
AT3G59490:exon:11 | 224 | Chr3: 21984596-21984819 | Arabidopsis thaliana |
AT3G59490:exon:10 | 181 | Chr3: 21984631-21984811 | Arabidopsis thaliana |
AT3G59490:exon:9 | 189 | Chr3: 21984631-21984819 | Arabidopsis thaliana |
AT3G59490:exon:7 | 45 | Chr3: 21984905-21984949 | Arabidopsis thaliana |
AT3G59490:exon:4 | 108 | Chr3: 21985316-21985423 | Arabidopsis thaliana |
AT3G59490:exon:8 | 148 | Chr3: 21984802-21984949 | Arabidopsis thaliana |
AT3G59490:exon:6 | 111 | Chr3: 21985019-21985129 | Arabidopsis thaliana |
AT3G59490:exon:5 | 203 | Chr3: 21985221-21985423 | Arabidopsis thaliana |
AT3G59490:exon:3 | 150 | Chr3: 21985525-21985674 | Arabidopsis thaliana |
AT3G59490:exon:2 | 110 | Chr3: 21985755-21985864 | Arabidopsis thaliana |
AT3G59490:exon:1 | 192 | Chr3: 21986160-21986351 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G59490:five_prime_UTR:1 | 89 | Chr3: 21986263-21986351 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G59480 | locus:2097553 | AT3G59480 | 1610 | Chr3: 21982989-21984598 | A. thaliana | pfkB-like carbohydrate kinase family protein;(source:Araport11) | Encodes a member of the fructokinase gene family. Nomenclature according to Riggs 2017 has been adopted for the family by the community (personal communication, Boernke, Callis, Granot, Boernke, and Smeekens). | pfkB-like carbohydrate kinase family protein | FRK4, FRK7 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G59480.1 | 1253 | Chr3: 21982989-21984598 |
AT3G59490.2 | 1035 | Chr3: 21984596-21986351 |
AT3G59490.1 | 992 | Chr3: 21984631-21986351 |
AT3G59490.3 | 905 | Chr3: 21984631-21986351 |
AT3G59490.4 | 914 | Chr3: 21984802-21986351 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G59480:three_prime_UTR:1 | 158 | Chr3: 21984441-21984598 | Arabidopsis thaliana |
AT3G59490:three_prime_UTR:2 | 64 | Chr3: 21984596-21984659 | Arabidopsis thaliana |
AT3G59490:three_prime_UTR:1 | 171 | Chr3: 21984631-21984801 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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