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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G59430:CDS:6 | 42 | Chr3: 21964484-21964525 | Arabidopsis thaliana |
AT3G59430:CDS:5 | 975 | Chr3: 21964611-21965585 | Arabidopsis thaliana |
AT3G59430:CDS:3 | 101 | Chr3: 21965864-21965964 | Arabidopsis thaliana |
AT3G59430:CDS:2 | 103 | Chr3: 21966054-21966156 | Arabidopsis thaliana |
AT3G59430:CDS:1 | 135 | Chr3: 21966363-21966497 | Arabidopsis thaliana |
AT3G59430:CDS:6.1 | 42 | Chr3: 21964484-21964525 | Arabidopsis thaliana |
AT3G59430:CDS:4 | 996 | Chr3: 21964611-21965606 | Arabidopsis thaliana |
AT3G59430:CDS:6.2 | 42 | Chr3: 21964484-21964525 | Arabidopsis thaliana |
AT3G59430:CDS:4.1 | 996 | Chr3: 21964611-21965606 | Arabidopsis thaliana |
AT3G59430:CDS:6.3 | 42 | Chr3: 21964484-21964525 | Arabidopsis thaliana |
AT3G59430:CDS:4.2 | 996 | Chr3: 21964611-21965606 | Arabidopsis thaliana |
AT3G59430:CDS:6.4 | 42 | Chr3: 21964484-21964525 | Arabidopsis thaliana |
AT3G59430:CDS:5.1 | 975 | Chr3: 21964611-21965585 | Arabidopsis thaliana |
AT3G59430:CDS:3.1 | 101 | Chr3: 21965864-21965964 | Arabidopsis thaliana |
AT3G59430:CDS:2.1 | 103 | Chr3: 21966054-21966156 | Arabidopsis thaliana |
AT3G59430:CDS:1.1 | 135 | Chr3: 21966363-21966497 | Arabidopsis thaliana |
AT3G59430:CDS:6.5 | 42 | Chr3: 21964484-21964525 | Arabidopsis thaliana |
AT3G59430:CDS:5.2 | 975 | Chr3: 21964611-21965585 | Arabidopsis thaliana |
AT3G59430:CDS:3.2 | 101 | Chr3: 21965864-21965964 | Arabidopsis thaliana |
AT3G59430:CDS:2.2 | 103 | Chr3: 21966054-21966156 | Arabidopsis thaliana |
AT3G59430:CDS:1.2 | 135 | Chr3: 21966363-21966497 | Arabidopsis thaliana |
AT3G59430:CDS:6.6 | 42 | Chr3: 21964484-21964525 | Arabidopsis thaliana |
AT3G59430:CDS:5.3 | 975 | Chr3: 21964611-21965585 | Arabidopsis thaliana |
AT3G59430:CDS:3.3 | 101 | Chr3: 21965864-21965964 | Arabidopsis thaliana |
AT3G59430:CDS:2.3 | 103 | Chr3: 21966054-21966156 | Arabidopsis thaliana |
AT3G59430:CDS:1.3 | 135 | Chr3: 21966363-21966497 | Arabidopsis thaliana |
AT3G59430:CDS:6.7 | 42 | Chr3: 21964484-21964525 | Arabidopsis thaliana |
AT3G59430:CDS:5.4 | 975 | Chr3: 21964611-21965585 | Arabidopsis thaliana |
AT3G59430:CDS:3.4 | 101 | Chr3: 21965864-21965964 | Arabidopsis thaliana |
AT3G59430:CDS:2.4 | 103 | Chr3: 21966054-21966156 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G59430:exon:18 | 423 | Chr3: 21963832-21964254 | Arabidopsis thaliana |
AT3G59430:exon:1 | 150 | Chr3: 21966929-21967078 | Arabidopsis thaliana |
AT3G59430:exon:12 | 1354 | Chr3: 21964611-21965964 | Arabidopsis thaliana |
AT3G59430:exon:7 | 166 | Chr3: 21966363-21966528 | Arabidopsis thaliana |
AT3G59430:exon:17 | 536 | Chr3: 21963990-21964525 | Arabidopsis thaliana |
AT3G59430:exon:11 | 1546 | Chr3: 21964611-21966156 | Arabidopsis thaliana |
AT3G59430:exon:16 | 241 | Chr3: 21964014-21964254 | Arabidopsis thaliana |
AT3G59430:exon:14 | 183 | Chr3: 21964343-21964525 | Arabidopsis thaliana |
AT3G59430:exon:2 | 128 | Chr3: 21966929-21967056 | Arabidopsis thaliana |
AT3G59430:exon:5 | 289 | Chr3: 21966628-21966916 | Arabidopsis thaliana |
AT3G59430:exon:6 | 370 | Chr3: 21966363-21966732 | Arabidopsis thaliana |
AT3G59430:exon:4 | 53 | Chr3: 21966929-21966981 | Arabidopsis thaliana |
AT3G59430:exon:15 | 461 | Chr3: 21964065-21964525 | Arabidopsis thaliana |
AT3G59430:exon:13 | 975 | Chr3: 21964611-21965585 | Arabidopsis thaliana |
AT3G59430:exon:10 | 101 | Chr3: 21965864-21965964 | Arabidopsis thaliana |
AT3G59430:exon:9 | 103 | Chr3: 21966054-21966156 | Arabidopsis thaliana |
AT3G59430:exon:8 | 135 | Chr3: 21966363-21966497 | Arabidopsis thaliana |
AT3G59430:exon:3 | 120 | Chr3: 21966929-21967048 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G59430:five_prime_UTR:1 | 150 | Chr3: 21966929-21967078 | Arabidopsis thaliana |
AT3G59430:five_prime_UTR:11 | 358 | Chr3: 21965607-21965964 | Arabidopsis thaliana |
AT3G59430:five_prime_UTR:9 | 103 | Chr3: 21966054-21966156 | Arabidopsis thaliana |
AT3G59430:five_prime_UTR:7 | 166 | Chr3: 21966363-21966528 | Arabidopsis thaliana |
AT3G59430:five_prime_UTR:10 | 550 | Chr3: 21965607-21966156 | Arabidopsis thaliana |
AT3G59430:five_prime_UTR:8 | 135 | Chr3: 21966363-21966497 | Arabidopsis thaliana |
AT3G59430:five_prime_UTR:2 | 128 | Chr3: 21966929-21967056 | Arabidopsis thaliana |
AT3G59430:five_prime_UTR:5 | 289 | Chr3: 21966628-21966916 | Arabidopsis thaliana |
AT3G59430:five_prime_UTR:6 | 235 | Chr3: 21966498-21966732 | Arabidopsis thaliana |
AT3G59430:five_prime_UTR:4 | 53 | Chr3: 21966929-21966981 | Arabidopsis thaliana |
AT3G59430:five_prime_UTR:3 | 120 | Chr3: 21966929-21967048 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G59430.2 | 2070 | Chr3: 21963832-21967078 |
AT3G59430.5 | 2159 | Chr3: 21963990-21966528 |
AT3G59430.4 | 2248 | Chr3: 21963990-21966528 |
AT3G59430.3 | 2337 | Chr3: 21963990-21967048 |
AT3G59430.6 | 2101 | Chr3: 21964014-21967056 |
AT3G59430.7 | 2064 | Chr3: 21964065-21966916 |
AT3G59430.1 | 2063 | Chr3: 21964065-21966981 |
AT3G59430.8 | 1895 | Chr3: 21964065-21967048 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G59430:three_prime_UTR:5 | 423 | Chr3: 21963832-21964254 | Arabidopsis thaliana |
AT3G59430:three_prime_UTR:4 | 494 | Chr3: 21963990-21964483 | Arabidopsis thaliana |
AT3G59430:three_prime_UTR:3 | 241 | Chr3: 21964014-21964254 | Arabidopsis thaliana |
AT3G59430:three_prime_UTR:1 | 141 | Chr3: 21964343-21964483 | Arabidopsis thaliana |
AT3G59430:three_prime_UTR:2 | 419 | Chr3: 21964065-21964483 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...