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Gene : AT3G58390 A. thaliana

DB identifier  ? AT3G58390 Secondary Identifier  ? locus:2085465
Brief Description  Eukaryotic release factor 1 (eRF1) family protein
TAIR Computational Description  Eukaryotic release factor 1 (eRF1) family protein;(source:Araport11)
TAIR Curator Summary  Represses the RNA the non-stop decay (NSD) and no-go decay (NGD) quality control systems that act during translation. Impairs NSD likely by sequestering the HBS1 components of the NSD complex.
TAIR Short Description  Eukaryotic release factor 1 (eRF1) family protein
TAIR Aliases  PEL2

0 Gene Rifs

1 Organism

6 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1305  
Location: Chr3:21600030-21601334 reverse strand

Gene models - AT3G58390 AT3G58390

? Gene models

Transcripts: 1  Exons: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

CDS: 1, Exon: 1, Five Prime UTR: 1, mRNA: 1

2 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PEL2_ARATH function Component of the Pelota-HBS1L complex, a complex that recognizes stalled ribosomes and triggers the No-Go Decay (NGD) pathway. In the Pelota-HBS1L complex, pelo recognizes ribosomes stalled at the 3' end of an mRNA and engages stalled ribosomes by destabilizing mRNA in the mRNA channel. Following ribosome-binding, the Pelota-HBS1L complex promotes the disassembly of stalled ribosomes, followed by degradation of damaged mRNAs as part of the NGD pathway.
PEL2_ARATH similarity Belongs to the eukaryotic release factor 1 family. Pelota subfamily.

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
cytoplasm  ? ECO  
molecular function
metal ion binding  ? ECO  
biological process
nuclear-transcribed mRNA catabolic process, non-stop decay  ? ECO  
RNA surveillance  ? ECO  
nuclear-transcribed mRNA catabolic process, no-go decay  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets