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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 16, Exons: 11, Five Prime UTRs: 2, mRNAs: 2, Three Prime UTRs: 2, Transposable Elements: 2, Transposon Fragments: 2
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G58050:CDS:1 | 96 | Chr3: 21492536-21492631 | Arabidopsis thaliana |
AT3G58050:CDS:2 | 369 | Chr3: 21492807-21493175 | Arabidopsis thaliana |
AT3G58050:CDS:4 | 260 | Chr3: 21493248-21493507 | Arabidopsis thaliana |
AT3G58050:CDS:5 | 142 | Chr3: 21493770-21493911 | Arabidopsis thaliana |
AT3G58050:CDS:6 | 372 | Chr3: 21494049-21494420 | Arabidopsis thaliana |
AT3G58050:CDS:7 | 132 | Chr3: 21494536-21494667 | Arabidopsis thaliana |
AT3G58050:CDS:8 | 129 | Chr3: 21494764-21494892 | Arabidopsis thaliana |
AT3G58050:CDS:9 | 2046 | Chr3: 21494973-21497018 | Arabidopsis thaliana |
AT3G58050:CDS:1.1 | 96 | Chr3: 21492536-21492631 | Arabidopsis thaliana |
AT3G58050:CDS:2.1 | 369 | Chr3: 21492807-21493175 | Arabidopsis thaliana |
AT3G58050:CDS:3 | 263 | Chr3: 21493245-21493507 | Arabidopsis thaliana |
AT3G58050:CDS:5.1 | 142 | Chr3: 21493770-21493911 | Arabidopsis thaliana |
AT3G58050:CDS:6.1 | 372 | Chr3: 21494049-21494420 | Arabidopsis thaliana |
AT3G58050:CDS:7.1 | 132 | Chr3: 21494536-21494667 | Arabidopsis thaliana |
AT3G58050:CDS:8.1 | 129 | Chr3: 21494764-21494892 | Arabidopsis thaliana |
AT3G58050:CDS:9.1 | 2046 | Chr3: 21494973-21497018 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G58050:exon:1 | 487 | Chr3: 21492145-21492631 | Arabidopsis thaliana |
AT3G58050:exon:5 | 260 | Chr3: 21493248-21493507 | Arabidopsis thaliana |
AT3G58050:exon:11 | 2345 | Chr3: 21494973-21497317 | Arabidopsis thaliana |
AT3G58050:exon:2 | 465 | Chr3: 21492167-21492631 | Arabidopsis thaliana |
AT3G58050:exon:3 | 369 | Chr3: 21492807-21493175 | Arabidopsis thaliana |
AT3G58050:exon:4 | 263 | Chr3: 21493245-21493507 | Arabidopsis thaliana |
AT3G58050:exon:6 | 142 | Chr3: 21493770-21493911 | Arabidopsis thaliana |
AT3G58050:exon:7 | 372 | Chr3: 21494049-21494420 | Arabidopsis thaliana |
AT3G58050:exon:8 | 132 | Chr3: 21494536-21494667 | Arabidopsis thaliana |
AT3G58050:exon:9 | 129 | Chr3: 21494764-21494892 | Arabidopsis thaliana |
AT3G58050:exon:10 | 2340 | Chr3: 21494973-21497312 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G58050:five_prime_UTR:1 | 391 | Chr3: 21492145-21492535 | Arabidopsis thaliana |
AT3G58050:five_prime_UTR:2 | 369 | Chr3: 21492167-21492535 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G58050.1 | 4236 | Chr3: 21492145-21497317 |
AT3G58050.2 | 4212 | Chr3: 21492167-21497312 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G58050:three_prime_UTR:2 | 299 | Chr3: 21497019-21497317 | Arabidopsis thaliana |
AT3G58050:three_prime_UTR:1 | 294 | Chr3: 21497019-21497312 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3TE87500 | 122 | Chr3: 21492075-21492196 | Arabidopsis thaliana |
AT3TE87520 | 486 | Chr3: 21497129-21497614 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3TE87500:transposon_fragment:1 | 122 | Chr3: 21492075-21492196 | Arabidopsis thaliana |
AT3TE87520:transposon_fragment:1 | 486 | Chr3: 21497129-21497614 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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