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Gene : SCE1 A. thaliana

DB identifier  ? AT3G57870 Secondary Identifier  ? locus:2095838
Name  ? sumo conjugation enzyme 1 Brief Description  sumo conjugation enzyme 1
TAIR Computational Description  sumo conjugation enzyme 1;(source:Araport11)
TAIR Curator Summary  Encodes a SUMO ligase that directs the attachment of the small protein SUMO to target proteins via an isopeptide bond. This enzyme is localized to the nucleus and plants with reduced levels of this protein show higher sensitivity to ABA in root growth inhibition assays. It has high similarity to the yeast UBC9 SUMO ligase and is sometimes referred to by that name.
TAIR Short Description  sumo conjugation enzyme 1
TAIR Aliases  AHUS5, ATSCE1, EMB1637, SCE1, SCE1A

5 Gene Rifs

1 Organism

32 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1903  
Location: Chr3:21428496-21430398 reverse strand

Gene models - SCE1 AT3G57870

? Gene models

Transcripts: 1  Exons: 5  Introns: 4 

Overlapping Features

? Genome features that overlap coordinates of this Gene

6 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SCE1_ARATH function SUMO-conjugating enzyme that accepts the SUMO proteins from the E1 SUMO-activating heterodimer SAE1/SAE2 and catalyzes its covalent attachment to other proteins with the E3 SUMO ligases SIZ1 and MMS21. Associates with SIZ1 for sumoylation of the transcription factor GTE3.
SCE1_ARATH pathway Protein modification; protein sumoylation.
SCE1_ARATH similarity Belongs to the ubiquitin-conjugating enzyme family.

1 Proteins

Function

Gene Ontology

cellular component
cytosol  ? ECO  
nucleus  ? ECO  
molecular function
SUMO transferase activity  ? ECO  
kinase binding  ? ECO  
SUMO conjugating enzyme activity  ? ECO  
SUMO binding  ? ECO  
ATP binding  ? ECO  
biological process
protein sumoylation  ? ECO  
response to abscisic acid  ? ECO  
embryo development ending in seed dormancy  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets