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Gene : AT3G57810 A. thaliana

DB identifier  ? AT3G57810 Secondary Identifier  ? locus:2095748
Brief Description  Cysteine proteinases superfamily protein
TAIR Computational Description  Cysteine proteinases superfamily protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  Cysteine proteinases superfamily protein

0 Gene Rifs

1 Organism

8 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2202  
Location: Chr3:21415760-21417961

Gene models - AT3G57810 AT3G57810

? Gene models

Transcripts: 4  Exons: 22  Introns: 18 

Overlapping Features

? Genome features that overlap coordinates of this Gene

15 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
OTU4_ARATH-4 OTU4_ARATH-5 OTU4_ARATH-3 OTU4_ARATH-2 OTU4_ARATH function Hydrolase that can remove conjugated ubiquitin from proteins in vitro and may therefore play an important regulatory role at the level of protein turnover by preventing degradation (PubMed:24659992). Cysteine protease with a preference for 'Lys-63' over 'Lys-48'-linked over 'Met-1' ubiquitin (UB) tetramers (e.g. Ub3 and Ub4) as substrates (PubMed:24659992). Cleaves also RUB-GST fusion (PubMed:24659992).
OTU4_ARATH-4 OTU4_ARATH-5 OTU4_ARATH-3 OTU4_ARATH-2 OTU4_ARATH similarity Belongs to the peptidase C65 family.
OTU4_ARATH-4 OTU4_ARATH-5 OTU4_ARATH-3 OTU4_ARATH-2 OTU4_ARATH subcellular location Prediction of a peroxisomal location.

5 Proteins

Function

Gene Ontology

cellular component
chloroplast  ? ECO  
molecular function
cysteine-type deubiquitinase activity  ? ECO  
biological process
No terms in this category.

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

5 Data Sets