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Gene : AT3G57800 A. thaliana

DB identifier  ? AT3G57800 Secondary Identifier  ? locus:2076581
Brief Description  basic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR Computational Description  basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)
TAIR Curator Summary  Together with bHLH48 associates with phytochrome interacting factor 7 to regulate hypocotyl elongation.
TAIR Short Description  basic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR Aliases  bHLH60

1 Gene Rifs

1 Organism

12 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4123  
Location: Chr3:21407782-21411904 reverse strand

Gene models - AT3G57800 AT3G57800

? Gene models

Transcripts: 2  Exons: 14  Introns: 12 

Overlapping Features

? Genome features that overlap coordinates of this Gene

CDSs: 14, Exons: 11, Five Prime UTRs: 2, Gene: 1, mRNAs: 2, snRNA: 1, Three Prime UTRs: 2

12 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
BH060_ARATH BH060_ARATH-2 tissue specificity Expressed constitutively in roots, leaves, stems, and flowers.

3 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
DNA-binding transcription factor activity  ? ECO  
DNA binding  ? ECO  
protein dimerization activity  ? ECO  
biological process
regulation of DNA-templated transcription  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets