External Links
- Aracyc
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- Plant Proteome Database
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- GeneVisible
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- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G57780:CDS:8 | 324 | Chr3: 21399766-21400089 | Arabidopsis thaliana |
AT3G57780:CDS:7 | 114 | Chr3: 21400170-21400283 | Arabidopsis thaliana |
AT3G57780:CDS:5 | 171 | Chr3: 21400368-21400538 | Arabidopsis thaliana |
AT3G57780:CDS:4 | 174 | Chr3: 21400630-21400803 | Arabidopsis thaliana |
AT3G57780:CDS:3 | 189 | Chr3: 21400909-21401097 | Arabidopsis thaliana |
AT3G57780:CDS:2 | 283 | Chr3: 21401199-21401481 | Arabidopsis thaliana |
AT3G57780:CDS:1 | 761 | Chr3: 21401569-21402329 | Arabidopsis thaliana |
AT3G57780:CDS:8.1 | 324 | Chr3: 21399766-21400089 | Arabidopsis thaliana |
AT3G57780:CDS:7.1 | 114 | Chr3: 21400170-21400283 | Arabidopsis thaliana |
AT3G57780:CDS:5.1 | 171 | Chr3: 21400368-21400538 | Arabidopsis thaliana |
AT3G57780:CDS:4.1 | 174 | Chr3: 21400630-21400803 | Arabidopsis thaliana |
AT3G57780:CDS:3.1 | 189 | Chr3: 21400909-21401097 | Arabidopsis thaliana |
AT3G57780:CDS:2.1 | 283 | Chr3: 21401199-21401481 | Arabidopsis thaliana |
AT3G57780:CDS:1.1 | 761 | Chr3: 21401569-21402329 | Arabidopsis thaliana |
AT3G57780:CDS:8.2 | 324 | Chr3: 21399766-21400089 | Arabidopsis thaliana |
AT3G57780:CDS:7.2 | 114 | Chr3: 21400170-21400283 | Arabidopsis thaliana |
AT3G57780:CDS:5.2 | 171 | Chr3: 21400368-21400538 | Arabidopsis thaliana |
AT3G57780:CDS:4.2 | 174 | Chr3: 21400630-21400803 | Arabidopsis thaliana |
AT3G57780:CDS:3.2 | 189 | Chr3: 21400909-21401097 | Arabidopsis thaliana |
AT3G57780:CDS:2.2 | 283 | Chr3: 21401199-21401481 | Arabidopsis thaliana |
AT3G57780:CDS:1.2 | 761 | Chr3: 21401569-21402329 | Arabidopsis thaliana |
AT3G57780:CDS:8.3 | 324 | Chr3: 21399766-21400089 | Arabidopsis thaliana |
AT3G57780:CDS:7.3 | 114 | Chr3: 21400170-21400283 | Arabidopsis thaliana |
AT3G57780:CDS:5.3 | 171 | Chr3: 21400368-21400538 | Arabidopsis thaliana |
AT3G57780:CDS:4.3 | 174 | Chr3: 21400630-21400803 | Arabidopsis thaliana |
AT3G57780:CDS:3.3 | 189 | Chr3: 21400909-21401097 | Arabidopsis thaliana |
AT3G57780:CDS:2.3 | 283 | Chr3: 21401199-21401481 | Arabidopsis thaliana |
AT3G57780:CDS:1.3 | 761 | Chr3: 21401569-21402329 | Arabidopsis thaliana |
AT3G57780:CDS:6 | 201 | Chr3: 21400338-21400538 | Arabidopsis thaliana |
AT3G57780:CDS:4.4 | 174 | Chr3: 21400630-21400803 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G57780:exon:5 | 968 | Chr3: 21401569-21402536 | Arabidopsis thaliana |
AT3G57780:exon:16 | 574 | Chr3: 21399516-21400089 | Arabidopsis thaliana |
AT3G57780:exon:4 | 141 | Chr3: 21402575-21402715 | Arabidopsis thaliana |
AT3G57780:exon:15 | 550 | Chr3: 21399540-21400089 | Arabidopsis thaliana |
AT3G57780:exon:2 | 195 | Chr3: 21402746-21402940 | Arabidopsis thaliana |
AT3G57780:exon:14 | 536 | Chr3: 21399554-21400089 | Arabidopsis thaliana |
AT3G57780:exon:12 | 114 | Chr3: 21400170-21400283 | Arabidopsis thaliana |
AT3G57780:exon:10 | 171 | Chr3: 21400368-21400538 | Arabidopsis thaliana |
AT3G57780:exon:1 | 18 | Chr3: 21402911-21402928 | Arabidopsis thaliana |
AT3G57780:exon:13 | 531 | Chr3: 21399559-21400089 | Arabidopsis thaliana |
AT3G57780:exon:11 | 369 | Chr3: 21400170-21400538 | Arabidopsis thaliana |
AT3G57780:exon:9 | 174 | Chr3: 21400630-21400803 | Arabidopsis thaliana |
AT3G57780:exon:8 | 189 | Chr3: 21400909-21401097 | Arabidopsis thaliana |
AT3G57780:exon:7 | 283 | Chr3: 21401199-21401481 | Arabidopsis thaliana |
AT3G57780:exon:6 | 828 | Chr3: 21401569-21402396 | Arabidopsis thaliana |
AT3G57780:exon:3 | 154 | Chr3: 21402746-21402899 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G57780:five_prime_UTR:5 | 207 | Chr3: 21402330-21402536 | Arabidopsis thaliana |
AT3G57780:five_prime_UTR:4 | 141 | Chr3: 21402575-21402715 | Arabidopsis thaliana |
AT3G57780:five_prime_UTR:2 | 195 | Chr3: 21402746-21402940 | Arabidopsis thaliana |
AT3G57780:five_prime_UTR:1 | 18 | Chr3: 21402911-21402928 | Arabidopsis thaliana |
AT3G57780:five_prime_UTR:6 | 67 | Chr3: 21402330-21402396 | Arabidopsis thaliana |
AT3G57780:five_prime_UTR:3 | 154 | Chr3: 21402746-21402899 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G57780.1 | 2473 | Chr3: 21399516-21402536 |
AT3G57780.2 | 2474 | Chr3: 21399516-21402715 |
AT3G57780.3 | 2504 | Chr3: 21399540-21402940 |
AT3G57780.4 | 2313 | Chr3: 21399554-21402928 |
AT3G57780.5 | 2528 | Chr3: 21399559-21402899 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G57780:three_prime_UTR:5 | 250 | Chr3: 21399516-21399765 | Arabidopsis thaliana |
AT3G57780:three_prime_UTR:4 | 226 | Chr3: 21399540-21399765 | Arabidopsis thaliana |
AT3G57780:three_prime_UTR:3 | 212 | Chr3: 21399554-21399765 | Arabidopsis thaliana |
AT3G57780:three_prime_UTR:2 | 531 | Chr3: 21399559-21400089 | Arabidopsis thaliana |
AT3G57780:three_prime_UTR:1 | 168 | Chr3: 21400170-21400337 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
nuclear pore | ECO |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...