External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G56730:CDS:1 | 46 | Chr3: 21014049-21014094 | Arabidopsis thaliana |
AT3G56730:CDS:5 | 198 | Chr3: 21014350-21014547 | Arabidopsis thaliana |
AT3G56730:CDS:7 | 275 | Chr3: 21014636-21014910 | Arabidopsis thaliana |
AT3G56730:CDS:6 | 103 | Chr3: 21014445-21014547 | Arabidopsis thaliana |
AT3G56730:CDS:7.1 | 275 | Chr3: 21014636-21014910 | Arabidopsis thaliana |
AT3G56730:CDS:1.1 | 46 | Chr3: 21014049-21014094 | Arabidopsis thaliana |
AT3G56730:CDS:4 | 159 | Chr3: 21014350-21014508 | Arabidopsis thaliana |
AT3G56730:CDS:7.2 | 275 | Chr3: 21014636-21014910 | Arabidopsis thaliana |
AT3G56730:CDS:1.2 | 46 | Chr3: 21014049-21014094 | Arabidopsis thaliana |
AT3G56730:CDS:5.1 | 198 | Chr3: 21014350-21014547 | Arabidopsis thaliana |
AT3G56730:CDS:7.3 | 275 | Chr3: 21014636-21014910 | Arabidopsis thaliana |
AT3G56730:CDS:3 | 220 | Chr3: 21014328-21014547 | Arabidopsis thaliana |
AT3G56730:CDS:7.4 | 275 | Chr3: 21014636-21014910 | Arabidopsis thaliana |
AT3G56730:CDS:2 | 28 | Chr3: 21014208-21014235 | Arabidopsis thaliana |
AT3G56730:CDS:5.2 | 198 | Chr3: 21014350-21014547 | Arabidopsis thaliana |
AT3G56730:CDS:7.5 | 275 | Chr3: 21014636-21014910 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G56730:exon:1 | 196 | Chr3: 21013703-21013898 | Arabidopsis thaliana |
AT3G56730:exon:10 | 443 | Chr3: 21014636-21015078 | Arabidopsis thaliana |
AT3G56730:exon:2 | 185 | Chr3: 21013714-21013898 | Arabidopsis thaliana |
AT3G56730:exon:4 | 83 | Chr3: 21014012-21014094 | Arabidopsis thaliana |
AT3G56730:exon:7 | 159 | Chr3: 21014350-21014508 | Arabidopsis thaliana |
AT3G56730:exon:11 | 446 | Chr3: 21014636-21015081 | Arabidopsis thaliana |
AT3G56730:exon:3 | 104 | Chr3: 21013991-21014094 | Arabidopsis thaliana |
AT3G56730:exon:9 | 390 | Chr3: 21014636-21015025 | Arabidopsis thaliana |
AT3G56730:exon:6 | 474 | Chr3: 21014074-21014547 | Arabidopsis thaliana |
AT3G56730:exon:5 | 162 | Chr3: 21014074-21014235 | Arabidopsis thaliana |
AT3G56730:exon:8 | 198 | Chr3: 21014350-21014547 | Arabidopsis thaliana |
AT3G56730:exon:12 | 522 | Chr3: 21014636-21015157 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G56730:five_prime_UTR:1 | 196 | Chr3: 21013703-21013898 | Arabidopsis thaliana |
AT3G56730:five_prime_UTR:7 | 95 | Chr3: 21014350-21014444 | Arabidopsis thaliana |
AT3G56730:five_prime_UTR:2 | 185 | Chr3: 21013714-21013898 | Arabidopsis thaliana |
AT3G56730:five_prime_UTR:4 | 37 | Chr3: 21014012-21014048 | Arabidopsis thaliana |
AT3G56730:five_prime_UTR:3 | 58 | Chr3: 21013991-21014048 | Arabidopsis thaliana |
AT3G56730:five_prime_UTR:6 | 254 | Chr3: 21014074-21014327 | Arabidopsis thaliana |
AT3G56730:five_prime_UTR:5 | 134 | Chr3: 21014074-21014207 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G56730.3 | 920 | Chr3: 21013703-21015078 |
AT3G56730.5 | 829 | Chr3: 21013714-21015081 |
AT3G56730.4 | 873 | Chr3: 21013714-21015081 |
AT3G56730.2 | 692 | Chr3: 21013991-21015025 |
AT3G56730.6 | 996 | Chr3: 21014074-21015157 |
AT3G56730.1 | 882 | Chr3: 21014074-21015157 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G56730:three_prime_UTR:2 | 168 | Chr3: 21014911-21015078 | Arabidopsis thaliana |
AT3G56730:three_prime_UTR:3 | 171 | Chr3: 21014911-21015081 | Arabidopsis thaliana |
AT3G56730:three_prime_UTR:1 | 115 | Chr3: 21014911-21015025 | Arabidopsis thaliana |
AT3G56730:three_prime_UTR:4 | 247 | Chr3: 21014911-21015157 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
peroxisome | ECO |
molecular function | |
endonuclease activity | ECO |
biological process | |
regulation of gene expression | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...