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Gene : PPD6 A. thaliana

DB identifier  ? AT3G56650 Secondary Identifier  ? locus:2102544
Name  ? PsbP-domain protein 6 Brief Description  thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein)
TAIR Computational Description  thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein);(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
TAIR Aliases  PPD6

1 Gene Rifs

1 Organism

15 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1674  
Location: Chr3:20984635-20986308

Gene models - PPD6 AT3G56650

? Gene models

Transcripts: 1  Exons: 3  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PPD6_ARATH function May be involved in the redox regulation of photosystem II.
PPD6_ARATH similarity Belongs to the PsbP family.

1 Proteins

Function

Gene Ontology

cellular component
chloroplast thylakoid lumen  ? ECO  
chloroplast thylakoid  ? ECO  
cytosol  ? ECO  
chloroplast stroma  ? ECO  
thylakoid  ? ECO  
photosystem II oxygen evolving complex  ? ECO  
thylakoid lumen  ? ECO  
extrinsic component of membrane  ? ECO  
chloroplast  ? ECO  
molecular function
calcium ion binding  ? ECO  
biological process
photosynthesis  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets