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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G56130:CDS:1 | 34 | Chr3: 20826852-20826885 | Arabidopsis thaliana |
AT3G56130:CDS:2 | 174 | Chr3: 20827146-20827319 | Arabidopsis thaliana |
AT3G56130:CDS:3 | 71 | Chr3: 20827623-20827693 | Arabidopsis thaliana |
AT3G56130:CDS:6 | 54 | Chr3: 20827901-20827954 | Arabidopsis thaliana |
AT3G56130:CDS:7 | 267 | Chr3: 20828138-20828404 | Arabidopsis thaliana |
AT3G56130:CDS:8 | 63 | Chr3: 20828504-20828566 | Arabidopsis thaliana |
AT3G56130:CDS:9 | 69 | Chr3: 20828651-20828719 | Arabidopsis thaliana |
AT3G56130:CDS:11 | 46 | Chr3: 20828799-20828844 | Arabidopsis thaliana |
AT3G56130:CDS:13 | 68 | Chr3: 20828940-20829007 | Arabidopsis thaliana |
AT3G56130:CDS:4 | 105 | Chr3: 20827850-20827954 | Arabidopsis thaliana |
AT3G56130:CDS:7.1 | 267 | Chr3: 20828138-20828404 | Arabidopsis thaliana |
AT3G56130:CDS:8.1 | 63 | Chr3: 20828504-20828566 | Arabidopsis thaliana |
AT3G56130:CDS:9.1 | 69 | Chr3: 20828651-20828719 | Arabidopsis thaliana |
AT3G56130:CDS:11.1 | 46 | Chr3: 20828799-20828844 | Arabidopsis thaliana |
AT3G56130:CDS:13.1 | 68 | Chr3: 20828940-20829007 | Arabidopsis thaliana |
AT3G56130:CDS:5 | 72 | Chr3: 20827887-20827958 | Arabidopsis thaliana |
AT3G56130:CDS:7.2 | 267 | Chr3: 20828138-20828404 | Arabidopsis thaliana |
AT3G56130:CDS:8.2 | 63 | Chr3: 20828504-20828566 | Arabidopsis thaliana |
AT3G56130:CDS:9.2 | 69 | Chr3: 20828651-20828719 | Arabidopsis thaliana |
AT3G56130:CDS:11.2 | 46 | Chr3: 20828799-20828844 | Arabidopsis thaliana |
AT3G56130:CDS:13.2 | 68 | Chr3: 20828940-20829007 | Arabidopsis thaliana |
AT3G56130:CDS:1.1 | 34 | Chr3: 20826852-20826885 | Arabidopsis thaliana |
AT3G56130:CDS:2.1 | 174 | Chr3: 20827146-20827319 | Arabidopsis thaliana |
AT3G56130:CDS:3.1 | 71 | Chr3: 20827623-20827693 | Arabidopsis thaliana |
AT3G56130:CDS:6.1 | 54 | Chr3: 20827901-20827954 | Arabidopsis thaliana |
AT3G56130:CDS:7.3 | 267 | Chr3: 20828138-20828404 | Arabidopsis thaliana |
AT3G56130:CDS:8.3 | 63 | Chr3: 20828504-20828566 | Arabidopsis thaliana |
AT3G56130:CDS:9.3 | 69 | Chr3: 20828651-20828719 | Arabidopsis thaliana |
AT3G56130:CDS:12 | 108 | Chr3: 20828799-20828906 | Arabidopsis thaliana |
AT3G56130:CDS:1.2 | 34 | Chr3: 20826852-20826885 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G56130:exon:1 | 310 | Chr3: 20826576-20826885 | Arabidopsis thaliana |
AT3G56130:exon:6 | 332 | Chr3: 20827623-20827954 | Arabidopsis thaliana |
AT3G56130:exon:2 | 228 | Chr3: 20826658-20826885 | Arabidopsis thaliana |
AT3G56130:exon:7 | 336 | Chr3: 20827623-20827958 | Arabidopsis thaliana |
AT3G56130:exon:13 | 46 | Chr3: 20828799-20828844 | Arabidopsis thaliana |
AT3G56130:exon:15 | 331 | Chr3: 20828940-20829270 | Arabidopsis thaliana |
AT3G56130:exon:11 | 69 | Chr3: 20828651-20828719 | Arabidopsis thaliana |
AT3G56130:exon:14 | 472 | Chr3: 20828799-20829270 | Arabidopsis thaliana |
AT3G56130:exon:3 | 226 | Chr3: 20826660-20826885 | Arabidopsis thaliana |
AT3G56130:exon:4 | 174 | Chr3: 20827146-20827319 | Arabidopsis thaliana |
AT3G56130:exon:5 | 71 | Chr3: 20827623-20827693 | Arabidopsis thaliana |
AT3G56130:exon:8 | 54 | Chr3: 20827901-20827954 | Arabidopsis thaliana |
AT3G56130:exon:9 | 267 | Chr3: 20828138-20828404 | Arabidopsis thaliana |
AT3G56130:exon:10 | 63 | Chr3: 20828504-20828566 | Arabidopsis thaliana |
AT3G56130:exon:12 | 620 | Chr3: 20828651-20829270 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G56130:five_prime_UTR:1 | 276 | Chr3: 20826576-20826851 | Arabidopsis thaliana |
AT3G56130:five_prime_UTR:5 | 227 | Chr3: 20827623-20827849 | Arabidopsis thaliana |
AT3G56130:five_prime_UTR:2 | 228 | Chr3: 20826658-20826885 | Arabidopsis thaliana |
AT3G56130:five_prime_UTR:4 | 174 | Chr3: 20827146-20827319 | Arabidopsis thaliana |
AT3G56130:five_prime_UTR:6 | 264 | Chr3: 20827623-20827886 | Arabidopsis thaliana |
AT3G56130:five_prime_UTR:3 | 192 | Chr3: 20826660-20826851 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G56130.1 | 1385 | Chr3: 20826576-20829270 |
AT3G56130.2 | 1510 | Chr3: 20826658-20829270 |
AT3G56130.3 | 1514 | Chr3: 20826658-20829270 |
AT3G56130.4 | 1396 | Chr3: 20826660-20829270 |
AT3G56130.5 | 1475 | Chr3: 20826660-20829270 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G56130:three_prime_UTR:3 | 263 | Chr3: 20829008-20829270 | Arabidopsis thaliana |
AT3G56130:three_prime_UTR:2 | 364 | Chr3: 20828907-20829270 | Arabidopsis thaliana |
AT3G56130:three_prime_UTR:1 | 539 | Chr3: 20828732-20829270 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...