External Links
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G55870:CDS:3 | 65 | Chr3: 20731326-20731390 | Arabidopsis thaliana |
AT3G55870:CDS:5 | 179 | Chr3: 20731477-20731655 | Arabidopsis thaliana |
AT3G55870:CDS:6 | 152 | Chr3: 20731776-20731927 | Arabidopsis thaliana |
AT3G55870:CDS:7 | 116 | Chr3: 20732012-20732127 | Arabidopsis thaliana |
AT3G55870:CDS:8 | 247 | Chr3: 20732223-20732469 | Arabidopsis thaliana |
AT3G55870:CDS:9 | 57 | Chr3: 20732558-20732614 | Arabidopsis thaliana |
AT3G55870:CDS:10 | 153 | Chr3: 20732705-20732857 | Arabidopsis thaliana |
AT3G55870:CDS:11 | 81 | Chr3: 20733045-20733125 | Arabidopsis thaliana |
AT3G55870:CDS:12 | 87 | Chr3: 20733252-20733338 | Arabidopsis thaliana |
AT3G55870:CDS:14 | 342 | Chr3: 20733424-20733765 | Arabidopsis thaliana |
AT3G55870:CDS:1 | 166 | Chr3: 20730918-20731083 | Arabidopsis thaliana |
AT3G55870:CDS:2 | 185 | Chr3: 20731206-20731390 | Arabidopsis thaliana |
AT3G55870:CDS:4 | 190 | Chr3: 20731466-20731655 | Arabidopsis thaliana |
AT3G55870:CDS:6.1 | 152 | Chr3: 20731776-20731927 | Arabidopsis thaliana |
AT3G55870:CDS:7.1 | 116 | Chr3: 20732012-20732127 | Arabidopsis thaliana |
AT3G55870:CDS:8.1 | 247 | Chr3: 20732223-20732469 | Arabidopsis thaliana |
AT3G55870:CDS:9.1 | 57 | Chr3: 20732558-20732614 | Arabidopsis thaliana |
AT3G55870:CDS:10.1 | 153 | Chr3: 20732705-20732857 | Arabidopsis thaliana |
AT3G55870:CDS:11.1 | 81 | Chr3: 20733045-20733125 | Arabidopsis thaliana |
AT3G55870:CDS:13 | 96 | Chr3: 20733252-20733347 | Arabidopsis thaliana |
AT3G55870:CDS:1.1 | 166 | Chr3: 20730918-20731083 | Arabidopsis thaliana |
AT3G55870:CDS:2.1 | 185 | Chr3: 20731206-20731390 | Arabidopsis thaliana |
AT3G55870:CDS:4.1 | 190 | Chr3: 20731466-20731655 | Arabidopsis thaliana |
AT3G55870:CDS:6.2 | 152 | Chr3: 20731776-20731927 | Arabidopsis thaliana |
AT3G55870:CDS:7.2 | 116 | Chr3: 20732012-20732127 | Arabidopsis thaliana |
AT3G55870:CDS:8.2 | 247 | Chr3: 20732223-20732469 | Arabidopsis thaliana |
AT3G55870:CDS:9.2 | 57 | Chr3: 20732558-20732614 | Arabidopsis thaliana |
AT3G55870:CDS:10.2 | 153 | Chr3: 20732705-20732857 | Arabidopsis thaliana |
AT3G55870:CDS:11.2 | 81 | Chr3: 20733045-20733125 | Arabidopsis thaliana |
AT3G55870:CDS:12.1 | 87 | Chr3: 20733252-20733338 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G55870:exon:1 | 242 | Chr3: 20730842-20731083 | Arabidopsis thaliana |
AT3G55870:exon:5 | 179 | Chr3: 20731477-20731655 | Arabidopsis thaliana |
AT3G55870:exon:13 | 652 | Chr3: 20733252-20733903 | Arabidopsis thaliana |
AT3G55870:exon:2 | 226 | Chr3: 20730858-20731083 | Arabidopsis thaliana |
AT3G55870:exon:3 | 185 | Chr3: 20731206-20731390 | Arabidopsis thaliana |
AT3G55870:exon:4 | 190 | Chr3: 20731466-20731655 | Arabidopsis thaliana |
AT3G55870:exon:6 | 152 | Chr3: 20731776-20731927 | Arabidopsis thaliana |
AT3G55870:exon:7 | 116 | Chr3: 20732012-20732127 | Arabidopsis thaliana |
AT3G55870:exon:8 | 247 | Chr3: 20732223-20732469 | Arabidopsis thaliana |
AT3G55870:exon:9 | 57 | Chr3: 20732558-20732614 | Arabidopsis thaliana |
AT3G55870:exon:10 | 153 | Chr3: 20732705-20732857 | Arabidopsis thaliana |
AT3G55870:exon:11 | 81 | Chr3: 20733045-20733125 | Arabidopsis thaliana |
AT3G55870:exon:12 | 87 | Chr3: 20733252-20733338 | Arabidopsis thaliana |
AT3G55870:exon:14 | 480 | Chr3: 20733424-20733903 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G55870:five_prime_UTR:1 | 242 | Chr3: 20730842-20731083 | Arabidopsis thaliana |
AT3G55870:five_prime_UTR:3 | 120 | Chr3: 20731206-20731325 | Arabidopsis thaliana |
AT3G55870:five_prime_UTR:2 | 60 | Chr3: 20730858-20730917 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G55870.1 | 1979 | Chr3: 20730842-20733903 |
AT3G55870.2 | 2059 | Chr3: 20730858-20733903 |
AT3G55870.3 | 1974 | Chr3: 20730858-20733903 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G55870:three_prime_UTR:1 | 556 | Chr3: 20733348-20733903 | Arabidopsis thaliana |
AT3G55870:three_prime_UTR:2 | 138 | Chr3: 20733766-20733903 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A1I9LMN9_ARATH F4IY44_ARATH | pathway | Amino-acid biosynthesis; L-tryptophan biosynthesis; L-tryptophan from chorismate: step 1/5. |
A0A1I9LMN9_ARATH F4IY44_ARATH | similarity | Belongs to the anthranilate synthase component I family. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
anthranilate synthase activity | ECO |
biological process | |
tryptophan biosynthetic process | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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