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Gene : AT3G55580 A. thaliana

DB identifier  ? AT3G55580 Secondary Identifier  ? locus:2099986
Brief Description  Regulator of chromosome condensation (RCC1) family protein
TAIR Computational Description  Regulator of chromosome condensation (RCC1) family protein;(source:Araport11)
TAIR Curator Summary  TCF1 encodes a member of the RCC1 gene family and is required for chromatin based gene regulation of cold responsive genes in a CBF-independent manner. It is expressed in response to cold but not ABA.
TAIR Short Description  Regulator of chromosome condensation (RCC1) family protein
TAIR Aliases  TCF1

1 Gene Rifs

1 Organism

3 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3240  
Location: Chr3:20612693-20615932

Gene models - AT3G55580 AT3G55580

? Gene models

Transcripts: 1  Exons: 11  Introns: 10 

Overlapping Features

? Genome features that overlap coordinates of this Gene

12 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

No comments found

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
histone binding  ? ECO  
biological process
cellular response to freezing  ? ECO  
cold acclimation  ? ECO  
regulation of lignin biosynthetic process  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets