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Gene : PAT2 A. thaliana

DB identifier  ? AT3G55480 Secondary Identifier  ? locus:2099961
Name  ? protein affected trafficking 2 Brief Description  protein affected trafficking 2
TAIR Computational Description  protein affected traf%26#64257;(source:Araport11)
TAIR Curator Summary  Encodes PAT2, a putative beta-subunit of adaptor protein complex 3 (AP-3) that can partially complement the corresponding yeast mutant. Mediates the biogenesis and function of lytic vacuoles.
TAIR Short Description  protein affected trafficking 2
TAIR Aliases  AP-3 beta, PAT2, WAT1

5 Gene Rifs

1 Organism

14 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 5001  
Location: Chr3:20566248-20571248 reverse strand

Gene models - PAT2 AT3G55480

? Gene models

Transcripts: 2  Exons: 21  Introns: 19 

Overlapping Features

? Genome features that overlap coordinates of this Gene

14 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
AP3BA_ARATH function Part of the AP-3 complex, an adaptor-related complex which seems to be clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. It also function in maintaining the identity of lytic vacuoles and in regulating the transition between storage and lytic vacuoles.
F4IWW1_ARATH AP3BA_ARATH similarity Belongs to the adaptor complexes large subunit family.
AP3BA_ARATH subcellular location Component of the coat surrounding the cytoplasmic face of coated vesicles located at the Golgi complex.

2 Proteins

Function

Gene Ontology

cellular component
cytoplasmic vesicle membrane  ? ECO  
membrane coat  ? ECO  
Golgi apparatus  ? ECO  
molecular function
No terms in this category.
biological process
intracellular protein transport  ? ECO  
vesicle-mediated transport  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


6 Homologues

 

Other

9 Data Sets