External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 50, Exons: 20, Five Prime UTR: 1, mRNAs: 3, Three Prime UTRs: 5, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G55020:CDS:18 | 144 | Chr3: 20389628-20389771 | Arabidopsis thaliana |
AT3G55020:CDS:15 | 102 | Chr3: 20390044-20390145 | Arabidopsis thaliana |
AT3G55020:CDS:14 | 81 | Chr3: 20390231-20390311 | Arabidopsis thaliana |
AT3G55020:CDS:13 | 70 | Chr3: 20390588-20390657 | Arabidopsis thaliana |
AT3G55020:CDS:12 | 62 | Chr3: 20390767-20390828 | Arabidopsis thaliana |
AT3G55020:CDS:11 | 407 | Chr3: 20390983-20391389 | Arabidopsis thaliana |
AT3G55020:CDS:10 | 84 | Chr3: 20391503-20391586 | Arabidopsis thaliana |
AT3G55020:CDS:9 | 93 | Chr3: 20391747-20391839 | Arabidopsis thaliana |
AT3G55020:CDS:8 | 52 | Chr3: 20391923-20391974 | Arabidopsis thaliana |
AT3G55020:CDS:7 | 67 | Chr3: 20392065-20392131 | Arabidopsis thaliana |
AT3G55020:CDS:6 | 59 | Chr3: 20392506-20392564 | Arabidopsis thaliana |
AT3G55020:CDS:5 | 114 | Chr3: 20392682-20392795 | Arabidopsis thaliana |
AT3G55020:CDS:4 | 180 | Chr3: 20392903-20393082 | Arabidopsis thaliana |
AT3G55020:CDS:3 | 603 | Chr3: 20393204-20393806 | Arabidopsis thaliana |
AT3G55020:CDS:2 | 70 | Chr3: 20394097-20394166 | Arabidopsis thaliana |
AT3G55020:CDS:1 | 83 | Chr3: 20394631-20394713 | Arabidopsis thaliana |
AT3G55020:CDS:20 | 114 | Chr3: 20389178-20389291 | Arabidopsis thaliana |
AT3G55020:CDS:19 | 94 | Chr3: 20389415-20389508 | Arabidopsis thaliana |
AT3G55020:CDS:17 | 125 | Chr3: 20389647-20389771 | Arabidopsis thaliana |
AT3G55020:CDS:15.1 | 102 | Chr3: 20390044-20390145 | Arabidopsis thaliana |
AT3G55020:CDS:14.1 | 81 | Chr3: 20390231-20390311 | Arabidopsis thaliana |
AT3G55020:CDS:13.1 | 70 | Chr3: 20390588-20390657 | Arabidopsis thaliana |
AT3G55020:CDS:12.1 | 62 | Chr3: 20390767-20390828 | Arabidopsis thaliana |
AT3G55020:CDS:11.1 | 407 | Chr3: 20390983-20391389 | Arabidopsis thaliana |
AT3G55020:CDS:10.1 | 84 | Chr3: 20391503-20391586 | Arabidopsis thaliana |
AT3G55020:CDS:9.1 | 93 | Chr3: 20391747-20391839 | Arabidopsis thaliana |
AT3G55020:CDS:8.1 | 52 | Chr3: 20391923-20391974 | Arabidopsis thaliana |
AT3G55020:CDS:7.1 | 67 | Chr3: 20392065-20392131 | Arabidopsis thaliana |
AT3G55020:CDS:6.1 | 59 | Chr3: 20392506-20392564 | Arabidopsis thaliana |
AT3G55020:CDS:5.1 | 114 | Chr3: 20392682-20392795 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G55020:exon:18 | 357 | Chr3: 20389415-20389771 | Arabidopsis thaliana |
AT3G55020:exon:17 | 125 | Chr3: 20389647-20389771 | Arabidopsis thaliana |
AT3G55020:exon:20 | 423 | Chr3: 20388869-20389291 | Arabidopsis thaliana |
AT3G55020:exon:19 | 94 | Chr3: 20389415-20389508 | Arabidopsis thaliana |
AT3G55020:exon:16 | 316 | Chr3: 20389647-20389962 | Arabidopsis thaliana |
AT3G55020:exon:15 | 102 | Chr3: 20390044-20390145 | Arabidopsis thaliana |
AT3G55020:exon:14 | 81 | Chr3: 20390231-20390311 | Arabidopsis thaliana |
AT3G55020:exon:13 | 70 | Chr3: 20390588-20390657 | Arabidopsis thaliana |
AT3G55020:exon:12 | 62 | Chr3: 20390767-20390828 | Arabidopsis thaliana |
AT3G55020:exon:11 | 407 | Chr3: 20390983-20391389 | Arabidopsis thaliana |
AT3G55020:exon:10 | 84 | Chr3: 20391503-20391586 | Arabidopsis thaliana |
AT3G55020:exon:9 | 93 | Chr3: 20391747-20391839 | Arabidopsis thaliana |
AT3G55020:exon:8 | 52 | Chr3: 20391923-20391974 | Arabidopsis thaliana |
AT3G55020:exon:7 | 67 | Chr3: 20392065-20392131 | Arabidopsis thaliana |
AT3G55020:exon:6 | 59 | Chr3: 20392506-20392564 | Arabidopsis thaliana |
AT3G55020:exon:5 | 114 | Chr3: 20392682-20392795 | Arabidopsis thaliana |
AT3G55020:exon:4 | 180 | Chr3: 20392903-20393082 | Arabidopsis thaliana |
AT3G55020:exon:3 | 603 | Chr3: 20393204-20393806 | Arabidopsis thaliana |
AT3G55020:exon:2 | 70 | Chr3: 20394097-20394166 | Arabidopsis thaliana |
AT3G55020:exon:1 | 357 | Chr3: 20394631-20394987 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G55020:five_prime_UTR:1 | 274 | Chr3: 20394714-20394987 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G55020.3 | 3181 | Chr3: 20388869-20394987 |
AT3G55020.1 | 3043 | Chr3: 20388869-20394987 |
AT3G55020.2 | 3234 | Chr3: 20388869-20394987 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G55020:three_prime_UTR:2 | 213 | Chr3: 20389415-20389627 | Arabidopsis thaliana |
AT3G55020:three_prime_UTR:5 | 309 | Chr3: 20388869-20389177 | Arabidopsis thaliana |
AT3G55020:three_prime_UTR:4 | 423 | Chr3: 20388869-20389291 | Arabidopsis thaliana |
AT3G55020:three_prime_UTR:3 | 94 | Chr3: 20389415-20389508 | Arabidopsis thaliana |
AT3G55020:three_prime_UTR:1 | 277 | Chr3: 20389647-20389923 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3TE82900 | 61 | Chr3: 20394911-20394971 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3TE82900:transposon_fragment:1 | 61 | Chr3: 20394911-20394971 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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