External Links
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54750:CDS:16 | 220 | Chr3: 20264833-20265052 | Arabidopsis thaliana |
AT3G54750:CDS:15 | 137 | Chr3: 20265147-20265283 | Arabidopsis thaliana |
AT3G54750:CDS:14 | 88 | Chr3: 20265389-20265476 | Arabidopsis thaliana |
AT3G54750:CDS:13 | 110 | Chr3: 20265596-20265705 | Arabidopsis thaliana |
AT3G54750:CDS:12 | 102 | Chr3: 20265839-20265940 | Arabidopsis thaliana |
AT3G54750:CDS:11 | 122 | Chr3: 20266154-20266275 | Arabidopsis thaliana |
AT3G54750:CDS:10 | 99 | Chr3: 20266634-20266732 | Arabidopsis thaliana |
AT3G54750:CDS:9 | 215 | Chr3: 20266822-20267036 | Arabidopsis thaliana |
AT3G54750:CDS:8 | 191 | Chr3: 20267304-20267494 | Arabidopsis thaliana |
AT3G54750:CDS:7 | 151 | Chr3: 20267576-20267726 | Arabidopsis thaliana |
AT3G54750:CDS:5 | 83 | Chr3: 20267810-20267892 | Arabidopsis thaliana |
AT3G54750:CDS:3 | 136 | Chr3: 20267994-20268129 | Arabidopsis thaliana |
AT3G54750:CDS:2 | 74 | Chr3: 20268196-20268269 | Arabidopsis thaliana |
AT3G54750:CDS:1 | 45 | Chr3: 20268372-20268416 | Arabidopsis thaliana |
AT3G54750:CDS:16.1 | 220 | Chr3: 20264833-20265052 | Arabidopsis thaliana |
AT3G54750:CDS:15.1 | 137 | Chr3: 20265147-20265283 | Arabidopsis thaliana |
AT3G54750:CDS:14.1 | 88 | Chr3: 20265389-20265476 | Arabidopsis thaliana |
AT3G54750:CDS:13.1 | 110 | Chr3: 20265596-20265705 | Arabidopsis thaliana |
AT3G54750:CDS:12.1 | 102 | Chr3: 20265839-20265940 | Arabidopsis thaliana |
AT3G54750:CDS:11.1 | 122 | Chr3: 20266154-20266275 | Arabidopsis thaliana |
AT3G54750:CDS:10.1 | 99 | Chr3: 20266634-20266732 | Arabidopsis thaliana |
AT3G54750:CDS:9.1 | 215 | Chr3: 20266822-20267036 | Arabidopsis thaliana |
AT3G54750:CDS:8.1 | 191 | Chr3: 20267304-20267494 | Arabidopsis thaliana |
AT3G54750:CDS:7.1 | 151 | Chr3: 20267576-20267726 | Arabidopsis thaliana |
AT3G54750:CDS:5.1 | 83 | Chr3: 20267810-20267892 | Arabidopsis thaliana |
AT3G54750:CDS:4 | 133 | Chr3: 20267994-20268126 | Arabidopsis thaliana |
AT3G54750:CDS:2.1 | 74 | Chr3: 20268196-20268269 | Arabidopsis thaliana |
AT3G54750:CDS:1.1 | 45 | Chr3: 20268372-20268416 | Arabidopsis thaliana |
AT3G54750:CDS:16.2 | 220 | Chr3: 20264833-20265052 | Arabidopsis thaliana |
AT3G54750:CDS:15.2 | 137 | Chr3: 20265147-20265283 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54740:exon:13 | 323 | Chr3: 20264364-20264686 | Arabidopsis thaliana |
AT3G54740:exon:12 | 298 | Chr3: 20264364-20264661 | Arabidopsis thaliana |
AT3G54750:exon:23 | 419 | Chr3: 20264634-20265052 | Arabidopsis thaliana |
AT3G54750:exon:22 | 411 | Chr3: 20264642-20265052 | Arabidopsis thaliana |
AT3G54750:exon:1 | 235 | Chr3: 20268651-20268885 | Arabidopsis thaliana |
AT3G54750:exon:7 | 136 | Chr3: 20267994-20268129 | Arabidopsis thaliana |
AT3G54750:exon:5 | 82 | Chr3: 20268372-20268453 | Arabidopsis thaliana |
AT3G54750:exon:21 | 364 | Chr3: 20264689-20265052 | Arabidopsis thaliana |
AT3G54750:exon:10 | 154 | Chr3: 20267576-20267729 | Arabidopsis thaliana |
AT3G54750:exon:2 | 231 | Chr3: 20268651-20268881 | Arabidopsis thaliana |
AT3G54750:exon:20 | 360 | Chr3: 20264693-20265052 | Arabidopsis thaliana |
AT3G54750:exon:19 | 137 | Chr3: 20265147-20265283 | Arabidopsis thaliana |
AT3G54750:exon:18 | 88 | Chr3: 20265389-20265476 | Arabidopsis thaliana |
AT3G54750:exon:17 | 110 | Chr3: 20265596-20265705 | Arabidopsis thaliana |
AT3G54750:exon:16 | 102 | Chr3: 20265839-20265940 | Arabidopsis thaliana |
AT3G54750:exon:15 | 122 | Chr3: 20266154-20266275 | Arabidopsis thaliana |
AT3G54750:exon:14 | 99 | Chr3: 20266634-20266732 | Arabidopsis thaliana |
AT3G54750:exon:13 | 215 | Chr3: 20266822-20267036 | Arabidopsis thaliana |
AT3G54750:exon:12 | 191 | Chr3: 20267304-20267494 | Arabidopsis thaliana |
AT3G54750:exon:11 | 151 | Chr3: 20267576-20267726 | Arabidopsis thaliana |
AT3G54750:exon:9 | 83 | Chr3: 20267810-20267892 | Arabidopsis thaliana |
AT3G54750:exon:8 | 133 | Chr3: 20267994-20268126 | Arabidopsis thaliana |
AT3G54750:exon:6 | 74 | Chr3: 20268196-20268269 | Arabidopsis thaliana |
AT3G54750:exon:4 | 100 | Chr3: 20268372-20268471 | Arabidopsis thaliana |
AT3G54750:exon:3 | 221 | Chr3: 20268651-20268871 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54750:five_prime_UTR:1 | 235 | Chr3: 20268651-20268885 | Arabidopsis thaliana |
AT3G54750:five_prime_UTR:5 | 37 | Chr3: 20268417-20268453 | Arabidopsis thaliana |
AT3G54750:five_prime_UTR:2 | 231 | Chr3: 20268651-20268881 | Arabidopsis thaliana |
AT3G54750:five_prime_UTR:4 | 55 | Chr3: 20268417-20268471 | Arabidopsis thaliana |
AT3G54750:five_prime_UTR:3 | 221 | Chr3: 20268651-20268871 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G54740 | locus:2102405 | AT3G54740 | 2512 | Chr3: 20262175-20264686 | A. thaliana | zein-binding protein (Protein of unknown function, DUF593);(source:Araport11) | NULL | Protein of unknown function, DUF593 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G54740.4 | 2027 | Chr3: 20262175-20264686 |
AT3G54740.2 | 2102 | Chr3: 20262175-20264686 |
AT3G54740.3 | 2218 | Chr3: 20262175-20264686 |
AT3G54740.1 | 1911 | Chr3: 20262175-20264686 |
AT3G54740.5 | 2086 | Chr3: 20262375-20264661 |
AT3G54740.7 | 1895 | Chr3: 20262375-20264661 |
AT3G54740.6 | 1970 | Chr3: 20262375-20264661 |
AT3G54740.8 | 1779 | Chr3: 20262375-20264661 |
AT3G54750.3 | 2262 | Chr3: 20264634-20268885 |
AT3G54750.2 | 2233 | Chr3: 20264642-20268885 |
AT3G54750.5 | 2185 | Chr3: 20264689-20268881 |
AT3G54750.4 | 2203 | Chr3: 20264689-20268881 |
AT3G54750.1 | 2186 | Chr3: 20264693-20268871 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54740:three_prime_UTR:2 | 220 | Chr3: 20264467-20264686 | Arabidopsis thaliana |
AT3G54740:three_prime_UTR:1 | 195 | Chr3: 20264467-20264661 | Arabidopsis thaliana |
AT3G54750:three_prime_UTR:4 | 199 | Chr3: 20264634-20264832 | Arabidopsis thaliana |
AT3G54750:three_prime_UTR:3 | 191 | Chr3: 20264642-20264832 | Arabidopsis thaliana |
AT3G54750:three_prime_UTR:2 | 144 | Chr3: 20264689-20264832 | Arabidopsis thaliana |
AT3G54750:three_prime_UTR:1 | 140 | Chr3: 20264693-20264832 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A1I9LR33_ARATH F4JE17_ARATH Q8GXI8_ARATH | similarity | Belongs to the DONSON family. |
Function
Gene Ontology
cellular component | |
---|---|
nucleus | ECO |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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