External Links
- Aracyc
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- Agrisera Antibodies
- ATTED-II
- T-DNA Express
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54740:CDS:2 | 1023 | Chr3: 20263093-20264115 | Arabidopsis thaliana |
AT3G54740:CDS:3 | 47 | Chr3: 20264218-20264264 | Arabidopsis thaliana |
AT3G54740:CDS:4 | 103 | Chr3: 20264364-20264466 | Arabidopsis thaliana |
AT3G54740:CDS:1 | 1167 | Chr3: 20262949-20264115 | Arabidopsis thaliana |
AT3G54740:CDS:3.1 | 47 | Chr3: 20264218-20264264 | Arabidopsis thaliana |
AT3G54740:CDS:4.1 | 103 | Chr3: 20264364-20264466 | Arabidopsis thaliana |
AT3G54740:CDS:1.1 | 1167 | Chr3: 20262949-20264115 | Arabidopsis thaliana |
AT3G54740:CDS:3.2 | 47 | Chr3: 20264218-20264264 | Arabidopsis thaliana |
AT3G54740:CDS:4.2 | 103 | Chr3: 20264364-20264466 | Arabidopsis thaliana |
AT3G54740:CDS:2.1 | 1023 | Chr3: 20263093-20264115 | Arabidopsis thaliana |
AT3G54740:CDS:3.3 | 47 | Chr3: 20264218-20264264 | Arabidopsis thaliana |
AT3G54740:CDS:4.3 | 103 | Chr3: 20264364-20264466 | Arabidopsis thaliana |
AT3G54740:CDS:1.2 | 1167 | Chr3: 20262949-20264115 | Arabidopsis thaliana |
AT3G54740:CDS:3.4 | 47 | Chr3: 20264218-20264264 | Arabidopsis thaliana |
AT3G54740:CDS:4.4 | 103 | Chr3: 20264364-20264466 | Arabidopsis thaliana |
AT3G54740:CDS:2.2 | 1023 | Chr3: 20263093-20264115 | Arabidopsis thaliana |
AT3G54740:CDS:3.5 | 47 | Chr3: 20264218-20264264 | Arabidopsis thaliana |
AT3G54740:CDS:4.5 | 103 | Chr3: 20264364-20264466 | Arabidopsis thaliana |
AT3G54740:CDS:1.3 | 1167 | Chr3: 20262949-20264115 | Arabidopsis thaliana |
AT3G54740:CDS:3.6 | 47 | Chr3: 20264218-20264264 | Arabidopsis thaliana |
AT3G54740:CDS:4.6 | 103 | Chr3: 20264364-20264466 | Arabidopsis thaliana |
AT3G54740:CDS:2.3 | 1023 | Chr3: 20263093-20264115 | Arabidopsis thaliana |
AT3G54740:CDS:3.7 | 47 | Chr3: 20264218-20264264 | Arabidopsis thaliana |
AT3G54740:CDS:4.7 | 103 | Chr3: 20264364-20264466 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54740:exon:3 | 509 | Chr3: 20262337-20262845 | Arabidopsis thaliana |
AT3G54740:exon:4 | 1779 | Chr3: 20262337-20264115 | Arabidopsis thaliana |
AT3G54740:exon:1 | 69 | Chr3: 20262175-20262243 | Arabidopsis thaliana |
AT3G54740:exon:2 | 343 | Chr3: 20262337-20262679 | Arabidopsis thaliana |
AT3G54740:exon:13 | 323 | Chr3: 20264364-20264686 | Arabidopsis thaliana |
AT3G54740:exon:7 | 1741 | Chr3: 20262375-20264115 | Arabidopsis thaliana |
AT3G54740:exon:6 | 471 | Chr3: 20262375-20262845 | Arabidopsis thaliana |
AT3G54740:exon:9 | 1320 | Chr3: 20262796-20264115 | Arabidopsis thaliana |
AT3G54740:exon:5 | 305 | Chr3: 20262375-20262679 | Arabidopsis thaliana |
AT3G54740:exon:8 | 50 | Chr3: 20262796-20262845 | Arabidopsis thaliana |
AT3G54740:exon:10 | 1079 | Chr3: 20263037-20264115 | Arabidopsis thaliana |
AT3G54740:exon:11 | 47 | Chr3: 20264218-20264264 | Arabidopsis thaliana |
AT3G54740:exon:12 | 298 | Chr3: 20264364-20264661 | Arabidopsis thaliana |
AT3G54750:exon:23 | 419 | Chr3: 20264634-20265052 | Arabidopsis thaliana |
AT3G54750:exon:22 | 411 | Chr3: 20264642-20265052 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54740:five_prime_UTR:3 | 509 | Chr3: 20262337-20262845 | Arabidopsis thaliana |
AT3G54740:five_prime_UTR:4 | 612 | Chr3: 20262337-20262948 | Arabidopsis thaliana |
AT3G54740:five_prime_UTR:1 | 69 | Chr3: 20262175-20262243 | Arabidopsis thaliana |
AT3G54740:five_prime_UTR:2 | 343 | Chr3: 20262337-20262679 | Arabidopsis thaliana |
AT3G54740:five_prime_UTR:7 | 574 | Chr3: 20262375-20262948 | Arabidopsis thaliana |
AT3G54740:five_prime_UTR:6 | 471 | Chr3: 20262375-20262845 | Arabidopsis thaliana |
AT3G54740:five_prime_UTR:9 | 153 | Chr3: 20262796-20262948 | Arabidopsis thaliana |
AT3G54740:five_prime_UTR:5 | 305 | Chr3: 20262375-20262679 | Arabidopsis thaliana |
AT3G54740:five_prime_UTR:8 | 50 | Chr3: 20262796-20262845 | Arabidopsis thaliana |
AT3G54740:five_prime_UTR:10 | 56 | Chr3: 20263037-20263092 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G54750 | locus:2102415 | AT3G54750 | 4252 | Chr3: 20264634-20268885 | A. thaliana | downstream neighbor of Son;(source:Araport11) | NULL | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G54740.4 | 2027 | Chr3: 20262175-20264686 |
AT3G54740.2 | 2102 | Chr3: 20262175-20264686 |
AT3G54740.3 | 2218 | Chr3: 20262175-20264686 |
AT3G54740.1 | 1911 | Chr3: 20262175-20264686 |
AT3G54740.5 | 2086 | Chr3: 20262375-20264661 |
AT3G54740.7 | 1895 | Chr3: 20262375-20264661 |
AT3G54740.6 | 1970 | Chr3: 20262375-20264661 |
AT3G54740.8 | 1779 | Chr3: 20262375-20264661 |
AT3G54750.3 | 2262 | Chr3: 20264634-20268885 |
AT3G54750.2 | 2233 | Chr3: 20264642-20268885 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54740:three_prime_UTR:2 | 220 | Chr3: 20264467-20264686 | Arabidopsis thaliana |
AT3G54740:three_prime_UTR:1 | 195 | Chr3: 20264467-20264661 | Arabidopsis thaliana |
AT3G54750:three_prime_UTR:4 | 199 | Chr3: 20264634-20264832 | Arabidopsis thaliana |
AT3G54750:three_prime_UTR:3 | 191 | Chr3: 20264642-20264832 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
myosin XI tail binding | ECO |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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