Lists
This Gene is in one list:
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54350:CDS:7 | 81 | Chr3: 20122298-20122378 | Arabidopsis thaliana |
AT3G54350:CDS:6 | 129 | Chr3: 20122457-20122585 | Arabidopsis thaliana |
AT3G54350:CDS:5 | 87 | Chr3: 20122708-20122794 | Arabidopsis thaliana |
AT3G54350:CDS:4 | 149 | Chr3: 20122898-20123046 | Arabidopsis thaliana |
AT3G54350:CDS:3 | 52 | Chr3: 20123277-20123328 | Arabidopsis thaliana |
AT3G54350:CDS:2 | 1542 | Chr3: 20123414-20124955 | Arabidopsis thaliana |
AT3G54350:CDS:1 | 69 | Chr3: 20125963-20126031 | Arabidopsis thaliana |
AT3G54350:CDS:7.1 | 81 | Chr3: 20122298-20122378 | Arabidopsis thaliana |
AT3G54350:CDS:6.1 | 129 | Chr3: 20122457-20122585 | Arabidopsis thaliana |
AT3G54350:CDS:5.1 | 87 | Chr3: 20122708-20122794 | Arabidopsis thaliana |
AT3G54350:CDS:4.1 | 149 | Chr3: 20122898-20123046 | Arabidopsis thaliana |
AT3G54350:CDS:3.1 | 52 | Chr3: 20123277-20123328 | Arabidopsis thaliana |
AT3G54350:CDS:2.1 | 1542 | Chr3: 20123414-20124955 | Arabidopsis thaliana |
AT3G54350:CDS:1.1 | 69 | Chr3: 20125963-20126031 | Arabidopsis thaliana |
AT3G54350:CDS:7.2 | 81 | Chr3: 20122298-20122378 | Arabidopsis thaliana |
AT3G54350:CDS:6.2 | 129 | Chr3: 20122457-20122585 | Arabidopsis thaliana |
AT3G54350:CDS:5.2 | 87 | Chr3: 20122708-20122794 | Arabidopsis thaliana |
AT3G54350:CDS:4.2 | 149 | Chr3: 20122898-20123046 | Arabidopsis thaliana |
AT3G54350:CDS:3.2 | 52 | Chr3: 20123277-20123328 | Arabidopsis thaliana |
AT3G54350:CDS:2.2 | 1542 | Chr3: 20123414-20124955 | Arabidopsis thaliana |
AT3G54350:CDS:1.2 | 69 | Chr3: 20125963-20126031 | Arabidopsis thaliana |
AT3G54350:CDS:7.3 | 81 | Chr3: 20122298-20122378 | Arabidopsis thaliana |
AT3G54350:CDS:6.3 | 129 | Chr3: 20122457-20122585 | Arabidopsis thaliana |
AT3G54350:CDS:5.3 | 87 | Chr3: 20122708-20122794 | Arabidopsis thaliana |
AT3G54350:CDS:4.3 | 149 | Chr3: 20122898-20123046 | Arabidopsis thaliana |
AT3G54350:CDS:3.3 | 52 | Chr3: 20123277-20123328 | Arabidopsis thaliana |
AT3G54350:CDS:2.3 | 1542 | Chr3: 20123414-20124955 | Arabidopsis thaliana |
AT3G54350:CDS:1.3 | 69 | Chr3: 20125963-20126031 | Arabidopsis thaliana |
AT3G54350:CDS:7.4 | 81 | Chr3: 20122298-20122378 | Arabidopsis thaliana |
AT3G54350:CDS:6.4 | 129 | Chr3: 20122457-20122585 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54350:exon:17 | 362 | Chr3: 20122017-20122378 | Arabidopsis thaliana |
AT3G54350:exon:9 | 74 | Chr3: 20125963-20126036 | Arabidopsis thaliana |
AT3G54350:exon:4 | 68 | Chr3: 20126556-20126623 | Arabidopsis thaliana |
AT3G54350:exon:1 | 218 | Chr3: 20126764-20126981 | Arabidopsis thaliana |
AT3G54350:exon:7 | 63 | Chr3: 20126380-20126442 | Arabidopsis thaliana |
AT3G54350:exon:3 | 343 | Chr3: 20126556-20126898 | Arabidopsis thaliana |
AT3G54350:exon:16 | 351 | Chr3: 20122028-20122378 | Arabidopsis thaliana |
AT3G54350:exon:6 | 89 | Chr3: 20126380-20126468 | Arabidopsis thaliana |
AT3G54350:exon:2 | 365 | Chr3: 20126556-20126920 | Arabidopsis thaliana |
AT3G54350:exon:15 | 296 | Chr3: 20122083-20122378 | Arabidopsis thaliana |
AT3G54350:exon:14 | 129 | Chr3: 20122457-20122585 | Arabidopsis thaliana |
AT3G54350:exon:13 | 87 | Chr3: 20122708-20122794 | Arabidopsis thaliana |
AT3G54350:exon:12 | 149 | Chr3: 20122898-20123046 | Arabidopsis thaliana |
AT3G54350:exon:11 | 52 | Chr3: 20123277-20123328 | Arabidopsis thaliana |
AT3G54350:exon:10 | 1542 | Chr3: 20123414-20124955 | Arabidopsis thaliana |
AT3G54350:exon:8 | 152 | Chr3: 20125963-20126114 | Arabidopsis thaliana |
AT3G54350:exon:5 | 150 | Chr3: 20126380-20126529 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54350:five_prime_UTR:9 | 5 | Chr3: 20126032-20126036 | Arabidopsis thaliana |
AT3G54350:five_prime_UTR:4 | 68 | Chr3: 20126556-20126623 | Arabidopsis thaliana |
AT3G54350:five_prime_UTR:1 | 218 | Chr3: 20126764-20126981 | Arabidopsis thaliana |
AT3G54350:five_prime_UTR:7 | 63 | Chr3: 20126380-20126442 | Arabidopsis thaliana |
AT3G54350:five_prime_UTR:3 | 343 | Chr3: 20126556-20126898 | Arabidopsis thaliana |
AT3G54350:five_prime_UTR:6 | 89 | Chr3: 20126380-20126468 | Arabidopsis thaliana |
AT3G54350:five_prime_UTR:2 | 365 | Chr3: 20126556-20126920 | Arabidopsis thaliana |
AT3G54350:five_prime_UTR:8 | 83 | Chr3: 20126032-20126114 | Arabidopsis thaliana |
AT3G54350:five_prime_UTR:5 | 150 | Chr3: 20126380-20126529 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G54350.1 | 2848 | Chr3: 20122017-20126981 |
AT3G54350.3 | 2744 | Chr3: 20122017-20126981 |
AT3G54350.4 | 2868 | Chr3: 20122028-20126898 |
AT3G54350.2 | 2916 | Chr3: 20122028-20126920 |
AT3G54350.5 | 2557 | Chr3: 20122083-20126529 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54350:three_prime_UTR:3 | 281 | Chr3: 20122017-20122297 | Arabidopsis thaliana |
AT3G54350:three_prime_UTR:2 | 270 | Chr3: 20122028-20122297 | Arabidopsis thaliana |
AT3G54350:three_prime_UTR:1 | 215 | Chr3: 20122083-20122297 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
Ino80 complex | ECO |
MLL1 complex | ECO |
molecular function | |
G-quadruplex RNA binding | ECO |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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